RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 AFDNP55196 1824 aaKnown RBP10.8□□□□□ -0.68
SMG6-202ENST00000354901 BIN1O00499 593 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 HMGB1P09429 215 aaKnown RBP10.8□□□□□ -0.68
SMG6-202ENST00000354901 ZAP70P43403 619 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 MNAT1P51948 309 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 MICALL1Q8N3F8 863 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 SMARCC2Q8TAQ2 1214 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 CARD10Q9BWT7 1032 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 DENND2AQ9ULE3 1009 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 SMC2O95347 1197 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
SMG6-202ENST00000354901 XAGE2Q96GT9 111 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 DSCC1Q9BVC3 393 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 CEP83Q9Y592 693 aa10.8□□□□□ -0.68
SMG6-202ENST00000354901 KLF18A0A0U1RQI7 1052 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 GOLGA8BA8MQT2 603 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 CPLX1O14810 134 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 EXOSC10Q01780 885 aaKnown RBP10.79□□□□□ -0.68
SMG6-202ENST00000354901 PCDH11XQ9BZA7 1347 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 PCDH11YQ9BZA8 1340 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 CCDC172P0C7W6 258 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 PUS7LQ9H0K6 701 aaKnown RBP10.79□□□□□ -0.68
SMG6-202ENST00000354901 PRC1O43663 620 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 FGAP02671 866 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 EVA1CP58658 441 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 STK38Q15208 465 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 PTPN21Q16825 1174 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 RALYLQ86SE5 291 aaKnown RBP10.79□□□□□ -0.68
SMG6-202ENST00000354901 STK11IPQ8N1F8 1099 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 PLCH1Q4KWH8 1693 aa10.79□□□□□ -0.68
SMG6-202ENST00000354901 DNAJC10Q8IXB1 793 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 TDRD7Q8NHU6 1098 aaKnown RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 ZNF396Q96N95 335 aaPredicted RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 CXorf56Q9H5V9 222 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 ORC3Q9UBD5 711 aaPredicted RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMG6-202ENST00000354901 IDH1O75874 414 aaKnown RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 SASH3O75995 380 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 FDPSP14324 419 aaKnown RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 EVCP57679 992 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 IMMTQ16891 758 aaKnown RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 AOPEPQ8N6M6 819 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 C8orf76Q96K31 380 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 AIFM3Q96NN9 605 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 LLPHQ9BRT6 129 aaKnown RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 RCOR1Q9UKL0 485 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 CLIC4Q9Y696 253 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 LAMB4A4D0S4 1761 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 EIF3CLB5ME19 914 aaKnown RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 H2AFXP16104 143 aaPredicted RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 ZRSR1Q15695 479 aaKnown RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 METTL24Q5JXM2 366 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 NAA16Q6N069 864 aaPredicted RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 FBXO18Q8NFZ0 1043 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 EIF3CQ99613 913 aaKnown RBP10.78□□□□□ -0.68
SMG6-202ENST00000354901 ADAM21Q9UKJ8 722 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 ASAP1Q9ULH1 1129 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 PCDHA7Q9UN72 937 aa10.78□□□□□ -0.68
SMG6-202ENST00000354901 CARMIL3Q8ND23 1372 aa10.77□□□□□ -0.68
SMG6-202ENST00000354901 ECM2O94769 699 aaPredicted RBP10.77□□□□□ -0.68
SMG6-202ENST00000354901 MMP14P50281 582 aa10.77□□□□□ -0.68
SMG6-202ENST00000354901 IFIT5Q13325 482 aaKnown RBP10.77□□□□□ -0.68
SMG6-202ENST00000354901 PPP2R5AQ15172 486 aa10.77□□□□□ -0.68
SMG6-202ENST00000354901 MUM1L1Q5H9M0 696 aa10.77□□□□□ -0.68
SMG6-202ENST00000354901 CREBRFQ8IUR6 639 aa10.77□□□□□ -0.68
SMG6-202ENST00000354901 GOLGA5Q8TBA6 731 aa10.77□□□□□ -0.68
SMG6-202ENST00000354901 MARCKSP29966 332 aaPredicted RBP10.77□□□□□ -0.69
SMG6-202ENST00000354901 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.69
SMG6-202ENST00000354901 STX1AQ16623 288 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 LDHAL6AQ6ZMR3 332 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 RBM43Q6ZSC3 357 aaKnown RBP10.77□□□□□ -0.69
SMG6-202ENST00000354901 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 SUFUQ9UMX1 484 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 PAPPAQ13219 1627 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 TMC6Q7Z403 805 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 ANKRD20A12PQ8NF67 263 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 CNNM1Q9NRU3 951 aa10.77□□□□□ -0.69
SMG6-202ENST00000354901 ERVV-2B6SEH9 535 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 SNAP23O00161 211 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 GPAA1O43292 621 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 ATP2B1P20020 1258 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 PDE6BP35913 854 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 MAP2K2P36507 400 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 FAM160A1Q05DH4 1040 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 IQCB1Q15051 598 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 CCDC102AQ96A19 550 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 TMOD3Q9NYL9 352 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 ZNF213O14771 459 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 IL2RBP14784 551 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 NDUFA8P51970 172 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 CCDC91Q7Z6B0 441 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 INCENPQ9NQS7 918 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 SHANK3Q9BYB0 1731 aa10.76□□□□□ -0.69
SMG6-202ENST00000354901 FOXP2O15409 715 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 TCIRG1Q13488 830 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 WWC2Q6AWC2 1192 aa10.75□□□□□ -0.69
SMG6-202ENST00000354901 KIF6Q6ZMV9 814 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms