RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 USP8P40818 1118 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 SPECC1Q5M775 1068 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 MYSM1Q5VVJ2 828 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 L1RE1Q9UN81 338 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 NFE2L3Q9Y4A8 694 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 CLGNO14967 610 aa8.71□□□□□ -1.01
BRCA1-201ENST00000352993 KCNQ3O43525 872 aa8.71□□□□□ -1.01
BRCA1-201ENST00000352993 HAND2P61296 217 aa8.71□□□□□ -1.01
BRCA1-201ENST00000352993 ZNF827Q17R98 1081 aa8.71□□□□□ -1.01
BRCA1-201ENST00000352993 STOX1Q6ZVD7 989 aa8.71□□□□□ -1.01
BRCA1-201ENST00000352993 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.01
BRCA1-201ENST00000352993 SUCLG2Q96I99 432 aa8.71□□□□□ -1.01
BRCA1-201ENST00000352993 CARMIL3Q8ND23 1372 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 PDIA3P30101 505 aaKnown RBP8.71□□□□□ -1.02
BRCA1-201ENST00000352993 ATP6V1AP38606 617 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 EIF5P55010 431 aaKnown RBP8.71□□□□□ -1.02
BRCA1-201ENST00000352993 LONRF3Q496Y0 759 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 FBXW10Q5XX13 1052 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 CCDC102BQ68D86 513 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 SLC35F6Q8N357 371 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 RIN2Q8WYP3 895 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-201ENST00000352993 CLIC6Q96NY7 704 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 HINFPQ9BQA5 517 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 FAM107BQ9H098 131 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 GPHNQ9NQX3 736 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-201ENST00000352993 TMEM2Q9UHN6 1383 aa8.71□□□□□ -1.02
BRCA1-201ENST00000352993 A0A0U1RQJ8 604 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 AKR1B15C9JRZ8 316 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-201ENST00000352993 YEATS4O95619 227 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 JMYQ8N9B5 988 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 CCDC148Q8NFR7 591 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 ATRIPQ8WXE1 791 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 CDC5LQ99459 802 aaKnown RBP8.7□□□□□ -1.02
BRCA1-201ENST00000352993 GOLGA8BA8MQT2 603 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 ZMYND10O75800 440 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 CCDC172P0C7W6 258 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 CMA1P23946 247 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 TSGA10IPQ3SY00 556 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 CT47A1Q5JQC4 288 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-201ENST00000352993 TTC19Q6DKK2 380 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-201ENST00000352993 TC2NQ8N9U0 490 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 PCDHA5Q9Y5H7 936 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 MED23Q9ULK4 1368 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 PLEKHG1Q9ULL1 1385 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 SHTN1A0MZ66 631 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 LRRIQ3A6PVS8 624 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-201ENST00000352993 RDXP35241 583 aaKnown RBP8.7□□□□□ -1.02
BRCA1-201ENST00000352993 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 GIMAP7Q8NHV1 300 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 FAM212AQ96EL1 285 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 MED4Q9NPJ6 270 aa8.7□□□□□ -1.02
BRCA1-201ENST00000352993 KLF18A0A0U1RQI7 1052 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 GRM8O00222 908 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 GOLIM4O00461 696 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 CHRM1P11229 460 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-201ENST00000352993 STX17P56962 302 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 NLRP6P59044 892 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 NCAPH2Q6IBW4 605 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 CAGE1Q8TC20 777 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 HNRNPLLQ8WVV9 542 aaKnown RBP8.69□□□□□ -1.02
BRCA1-201ENST00000352993 CENPHQ9H3R5 247 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 CEP83Q9Y592 693 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 A0A0G2JLW4 131 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 INPP5BP32019 993 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 TMEM139Q8IV31 216 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 CAPZA3Q96KX2 299 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 NAPGQ99747 312 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-201ENST00000352993 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 E7EWF7 191 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 TDO2P48775 406 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 PDE4BQ07343 736 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 IGSF22Q8N9C0 903 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 NOA1Q8NC60 698 aaKnown RBP8.69□□□□□ -1.02
BRCA1-201ENST00000352993 FAM76AQ8TAV0 307 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 BCAS4Q8TDM0 211 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 HSD3B7Q9H2F3 369 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 C19orf44Q9H6X5 657 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 SAMM50Q9Y512 469 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 FAM169AQ9Y6X4 670 aa8.69□□□□□ -1.02
BRCA1-201ENST00000352993 PES1O00541 588 aaKnown RBP8.68□□□□□ -1.02
BRCA1-201ENST00000352993 FOXN1O15353 648 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 KIAA0754O94854 1291 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 STIM1Q13586 685 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 MAP9Q49MG5 647 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 JPH2Q9BR39 696 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-201ENST00000352993 LGR6Q9HBX8 967 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 SAMSN1Q9NSI8 373 aaKnown RBP8.68□□□□□ -1.02
BRCA1-201ENST00000352993 INTS13Q9NVM9 706 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 DBF4Q9UBU7 674 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-201ENST00000352993 CAPN7Q9Y6W3 813 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 MROH7-TTC4A0A0A0MT08 1334 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 RPS6KA5O75582 802 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 FDPSP14324 419 aaKnown RBP8.68□□□□□ -1.02
BRCA1-201ENST00000352993 TFCP2Q12800 502 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 USPL1Q5W0Q7 1092 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 GBP6Q6ZN66 633 aa8.68□□□□□ -1.02
BRCA1-201ENST00000352993 BRAPQ7Z569 592 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms