RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.17■□□□□ 0.34
TRAF3-202ENST00000351691 A0A1B0GVL5 298 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 ERLIN1O75477 346 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 TUBBP07437 444 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 TOP1P11387 765 aaKnown RBP17.16■□□□□ 0.34
TRAF3-202ENST00000351691 TBX2Q13207 712 aaPredicted RBP17.16■□□□□ 0.34
TRAF3-202ENST00000351691 BEND6Q5SZJ8 279 aaPredicted RBP17.16■□□□□ 0.34
TRAF3-202ENST00000351691 SUGP1Q8IWZ8 645 aaKnown RBP17.16■□□□□ 0.34
TRAF3-202ENST00000351691 MSANTD4Q8NCY6 345 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 SIL1Q9H173 461 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 TUBE1Q9UJT0 475 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 SPATA31A3Q5VYP0 1347 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 GYS2P54840 703 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 MYL5Q02045 173 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
TRAF3-202ENST00000351691 TNNI3KQ59H18 835 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
TRAF3-202ENST00000351691 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
TRAF3-202ENST00000351691 WDR24Q96S15 920 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 MYCBPQ99417 103 aaPredicted RBP17.16■□□□□ 0.34
TRAF3-202ENST00000351691 EPC1Q9H2F5 836 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 FPGT-TNNI3KV9GXZ4 949 aa17.16■□□□□ 0.34
TRAF3-202ENST00000351691 CYP27B1O15528 508 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 CABP4P57796 275 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 SRGAP1Q7Z6B7 1085 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 EIF3CLB5ME19 914 aaKnown RBP17.15■□□□□ 0.34
TRAF3-202ENST00000351691 ZNF202O95125 648 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 ATP2B1P20020 1258 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 CMA1P23946 247 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
TRAF3-202ENST00000351691 CEP112Q8N8E3 955 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 FBXW7Q969H0 707 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
TRAF3-202ENST00000351691 EIF3CQ99613 913 aaKnown RBP17.15■□□□□ 0.34
TRAF3-202ENST00000351691 VPS18Q9P253 973 aa17.15■□□□□ 0.34
TRAF3-202ENST00000351691 SERPINC1P01008 464 aa17.14■□□□□ 0.33
TRAF3-202ENST00000351691 STK38Q15208 465 aa17.14■□□□□ 0.33
TRAF3-202ENST00000351691 PACS2Q86VP3 889 aa17.14■□□□□ 0.33
TRAF3-202ENST00000351691 FAM71BQ8TC56 605 aa17.14■□□□□ 0.33
TRAF3-202ENST00000351691 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.33
TRAF3-202ENST00000351691 GLI3P10071 1580 aa17.14■□□□□ 0.33
TRAF3-202ENST00000351691 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.13■□□□□ 0.33
TRAF3-202ENST00000351691 CASP7P55210 303 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
TRAF3-202ENST00000351691 GBP3Q9H0R5 595 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 SPTLC2O15270 562 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 CYP21A2P08686 494 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 EXOSC10Q01780 885 aaKnown RBP17.13■□□□□ 0.33
TRAF3-202ENST00000351691 SWT1Q5T5J6 900 aaKnown RBP17.13■□□□□ 0.33
TRAF3-202ENST00000351691 BRAPQ7Z569 592 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 GPR108Q9NPR9 543 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 CARMIL3Q8ND23 1372 aa17.13■□□□□ 0.33
TRAF3-202ENST00000351691 CUTAO60888 179 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 ATP1A3P13637 1013 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 CHMP4BP1P59074 171 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 TFCP2Q12800 502 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 CFAP100Q494V2 611 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 EFCAB13Q8IY85 973 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 FBXL16Q8N461 479 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 DPF2Q92785 391 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 DHX58Q96C10 678 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 HAUS7Q99871 368 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 MED4Q9NPJ6 270 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 DBNLQ9UJU6 430 aaKnown RBP17.12■□□□□ 0.33
TRAF3-202ENST00000351691 A0A087WZG4 1122 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 H7C1W4 665 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 FAM107BQ9H098 131 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 DEF6Q9H4E7 631 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 ANKZF1Q9H8Y5 726 aa17.12■□□□□ 0.33
TRAF3-202ENST00000351691 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
TRAF3-202ENST00000351691 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
TRAF3-202ENST00000351691 MCMDC2Q4G0Z9 681 aa17.11■□□□□ 0.33
TRAF3-202ENST00000351691 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
TRAF3-202ENST00000351691 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
TRAF3-202ENST00000351691 FAM237AA0A1B0GTK4 181 aa17.1■□□□□ 0.33
TRAF3-202ENST00000351691 BIN1O00499 593 aa17.1■□□□□ 0.33
TRAF3-202ENST00000351691 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
TRAF3-202ENST00000351691 CDC23Q9UJX2 597 aa17.1■□□□□ 0.33
TRAF3-202ENST00000351691 CLIC4Q9Y696 253 aa17.1■□□□□ 0.33
TRAF3-202ENST00000351691 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 ZNF609O15014 1411 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 ERVV-2B6SEH9 535 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 LRRC31Q6UY01 552 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
TRAF3-202ENST00000351691 PALLDQ8WX93 1383 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 SH3TC1Q8TE82 1336 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 PFKFB1P16118 471 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 CCDC12Q8WUD4 166 aaPredicted RBP17.09■□□□□ 0.33
TRAF3-202ENST00000351691 FAN1Q9Y2M0 1017 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
TRAF3-202ENST00000351691 PCDH11XQ9BZA7 1347 aa17.08■□□□□ 0.33
TRAF3-202ENST00000351691 PCDH11YQ9BZA8 1340 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms