RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 AFDNP55196 1824 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-202ENST00000348749 A0A087WUV0 522 aaPredicted RBP11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 PTPDC1A2A3K4 754 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 CTDNEP1O95476 244 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 YEATS4O95619 227 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 TUBBP07437 444 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 HSPA2P54652 639 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 EIF5P55010 431 aaKnown RBP11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 MCM6Q14566 821 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 TADA2BQ86TJ2 420 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 FAM177A1Q8N128 213 aaPredicted RBP11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 LINC00301Q8NCQ3 95 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 BAG1Q99933 345 aaPredicted RBP11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 GBP3Q9H0R5 595 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 MED4Q9NPJ6 270 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 TOMM22Q9NS69 142 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 SERPINC1P01008 464 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 MYL5Q02045 173 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 CFAP100Q494V2 611 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 FMNL2Q96PY5 1086 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 SIL1Q9H173 461 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 ACBD3Q9H3P7 528 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 TUBE1Q9UJT0 475 aa11.83□□□□□ -0.52
CHRNA1-202ENST00000348749 ZNF202O95125 648 aa11.82□□□□□ -0.52
CHRNA1-202ENST00000348749 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
CHRNA1-202ENST00000348749 HSP90B2PQ58FF3 399 aa11.82□□□□□ -0.52
CHRNA1-202ENST00000348749 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
CHRNA1-202ENST00000348749 CNNM3Q8NE01 707 aa11.82□□□□□ -0.52
CHRNA1-202ENST00000348749 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
CHRNA1-202ENST00000348749 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
CHRNA1-202ENST00000348749 BIN1O00499 593 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 N4BP1O75113 896 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 GCP02774 474 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 DNAJC21Q5F1R6 531 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 ANKRD24Q8TF21 1146 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 CCDC12Q8WUD4 166 aaPredicted RBP11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 ZNF622Q969S3 477 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 LRRC59Q96AG4 307 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 CDC23Q9UJX2 597 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 CEP83Q9Y592 693 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 KIF1AQ12756 1690 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 TFCP2Q12800 502 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 CASP8Q14790 479 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 SART3Q15020 963 aaKnown RBP11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 BRAPQ7Z569 592 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 RPAINQ86UA6 219 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 PNKPQ96T60 521 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 CXorf56Q9H5V9 222 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 SLC52A2Q9HAB3 445 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 ABCB6Q9NP58 842 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 LAMB4A4D0S4 1761 aa11.81□□□□□ -0.52
CHRNA1-202ENST00000348749 TMEM232C9JQI7 657 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 KIF1CO43896 1103 aaKnown RBP11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 STK38Q15208 465 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 EPHA10Q5JZY3 1008 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 ZMYM1Q5SVZ6 1142 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 TOGARAM2Q6ZUX3 1019 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 GPATCH11Q8N954 259 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 TC2NQ8N9U0 490 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 XAGE3Q8WTP9 111 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 MYD88Q99836 296 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 VIPAS39Q9H9C1 493 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 DONSONQ9NYP3 566 aa11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
CHRNA1-202ENST00000348749 SPTLC2O15270 562 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 CMA1P23946 247 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 AARSP49588 968 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 GOLGA8FQ08AF8 430 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 GOLGA8DPQ0D2H9 430 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 AIMP1Q12904 312 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 SF3A1Q15459 793 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 CT47A1Q5JQC4 288 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 STOX1Q6ZVD7 989 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 INTS13Q9NVM9 706 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 WDR19Q8NEZ3 1342 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 PDIA3P30101 505 aaKnown RBP11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 FOSBP53539 338 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 COPS6Q7L5N1 327 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 LRP10Q7Z4F1 713 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 FAM204AQ9H8W3 233 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 CLIC4Q9Y696 253 aa11.79□□□□□ -0.52
CHRNA1-202ENST00000348749 CCDC196A0A1B0GTZ2 297 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 E7EWF7 191 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 APPP05067 770 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 CCDC175P0C221 793 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 PFKFB1P16118 471 aa11.78□□□□□ -0.52
CHRNA1-202ENST00000348749 E2F4Q16254 413 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms