RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IFIT2P09913 472 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-201ENST00000346501 RRP1P56182 461 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-201ENST00000346501 KIF23Q02241 960 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-201ENST00000346501 RASAL3Q86YV0 1011 aa19.29■□□□□ 0.68
TSPAN4-201ENST00000346501 ZNF512BQ96KM6 892 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-201ENST00000346501 MCAMP43121 646 aa19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 CACNB3P54284 484 aa19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 MAP3K11Q16584 847 aa19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 DCAF15Q66K64 600 aa19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 ANKRD13AQ8IZ07 590 aa19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 EAF2Q96CJ1 260 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 FAM163AQ96GL9 167 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-201ENST00000346501 AOX1Q06278 1338 aa19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 FAM155AB1AL88 458 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 MECOMQ03112 1051 aa19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 LDLRAD1Q5T700 205 aa19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 CDC42EP5Q6NZY7 148 aa19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 FAM151AQ8WW52 585 aa19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 IL1RAPL2Q9NP60 686 aa19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 PRDM10Q9NQV6 1147 aa19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 SNRKQ9NRH2 765 aa19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 DBNLQ9UJU6 430 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-201ENST00000346501 THSD7BQ9C0I4 1608 aa19.26■□□□□ 0.67
TSPAN4-201ENST00000346501 MAP4K4O95819 1239 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-201ENST00000346501 SREBF2Q12772 1141 aa19.26■□□□□ 0.67
TSPAN4-201ENST00000346501 PI16Q6UXB8 463 aa19.26■□□□□ 0.67
TSPAN4-201ENST00000346501 CSADQ9Y600 493 aa19.26■□□□□ 0.67
TSPAN4-201ENST00000346501 MROH7-TTC4A0A0A0MT08 1334 aa19.25■□□□□ 0.67
TSPAN4-201ENST00000346501 GAKO14976 1311 aa19.25■□□□□ 0.67
TSPAN4-201ENST00000346501 BAG3O95817 575 aa19.25■□□□□ 0.67
TSPAN4-201ENST00000346501 BTDP43251 543 aa19.25■□□□□ 0.67
TSPAN4-201ENST00000346501 NAA16Q6N069 864 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-201ENST00000346501 TBC1D9Q6ZT07 1266 aa19.25■□□□□ 0.67
TSPAN4-201ENST00000346501 SIRT2Q8IXJ6 389 aa19.25■□□□□ 0.67
TSPAN4-201ENST00000346501 RPAP1Q9BWH6 1393 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-201ENST00000346501 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-201ENST00000346501 PLCG2P16885 1265 aa19.24■□□□□ 0.67
TSPAN4-201ENST00000346501 LBX1P52954 281 aa19.24■□□□□ 0.67
TSPAN4-201ENST00000346501 TCP10Q12799 353 aa19.24■□□□□ 0.67
TSPAN4-201ENST00000346501 ZSCAN29Q8IWY8 852 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-201ENST00000346501 TEPSINQ96N21 525 aa19.24■□□□□ 0.67
TSPAN4-201ENST00000346501 LRRCC1Q9C099 1032 aa19.24■□□□□ 0.67
TSPAN4-201ENST00000346501 ENTPD3O75355 529 aa19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 ZBTB48P10074 688 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 INHBEP58166 350 aa19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 MAP3K9P80192 1104 aa19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 TTF1Q15361 905 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 NSUN4Q96CB9 384 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 SAGE1Q9NXZ1 904 aa19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 TLR7Q9NYK1 1049 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 FZD1Q9UP38 647 aa19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 MYH2Q9UKX2 1941 aa19.23■□□□□ 0.67
TSPAN4-201ENST00000346501 GPR75-ASB3A0A0A6YYF3 556 aa19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 MANSC4A6NHS7 340 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 HSPA8P11142 646 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 ZAP70P43403 619 aa19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 MKRN3Q13064 507 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 SPRYD7Q5W111 196 aa19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 TMED8Q6PL24 325 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 CSRNP1Q96S65 589 aa19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 IDI2Q9BXS1 227 aa19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 ZNF341Q9BYN7 854 aa19.22■□□□□ 0.67
TSPAN4-201ENST00000346501 SSC5DA1L4H1 1573 aa19.21■□□□□ 0.67
TSPAN4-201ENST00000346501 IDH1O75874 414 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-201ENST00000346501 CYP2E1P05181 493 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-201ENST00000346501 MAP3K12Q12852 859 aa19.21■□□□□ 0.67
TSPAN4-201ENST00000346501 ZIC5Q96T25 663 aa19.21■□□□□ 0.67
TSPAN4-201ENST00000346501 TRPA1O75762 1119 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 RGS3P49796 1198 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 NFIAQ12857 509 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 PICALMQ13492 652 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 COL13A1Q5TAT6 717 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 OTUD7BQ6GQQ9 843 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 CERS3Q8IU89 383 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 TNS4Q8IZW8 715 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 GPATCH3Q96I76 525 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 CLMNQ96JQ2 1002 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 WRNIP1Q96S55 665 aa19.2■□□□□ 0.66
TSPAN4-201ENST00000346501 AK9Q5TCS8 1911 aa19.19■□□□□ 0.66
TSPAN4-201ENST00000346501 ALDH1A1P00352 501 aa19.19■□□□□ 0.66
TSPAN4-201ENST00000346501 AAMPQ13685 434 aa19.19■□□□□ 0.66
TSPAN4-201ENST00000346501 TEX11Q8IYF3 940 aa19.19■□□□□ 0.66
TSPAN4-201ENST00000346501 WNK4Q96J92 1243 aa19.19■□□□□ 0.66
TSPAN4-201ENST00000346501 ELP3Q9H9T3 547 aa19.19■□□□□ 0.66
TSPAN4-201ENST00000346501 FAM198AQ9UFP1 575 aa19.19■□□□□ 0.66
TSPAN4-201ENST00000346501 TM4SF4P48230 202 aa19.18■□□□□ 0.66
TSPAN4-201ENST00000346501 MIGA2Q7L4E1 593 aa19.18■□□□□ 0.66
TSPAN4-201ENST00000346501 CDAN1Q8IWY9 1227 aa19.18■□□□□ 0.66
TSPAN4-201ENST00000346501 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.18■□□□□ 0.663e-7■■■□□ 17.9
TSPAN4-201ENST00000346501 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.18■□□□□ 0.66
TSPAN4-201ENST00000346501 RNF186Q9NXI6 227 aa19.18■□□□□ 0.66
TSPAN4-201ENST00000346501 TSKSQ9UJT2 592 aa19.18■□□□□ 0.66
TSPAN4-201ENST00000346501 NPM3O75607 178 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-201ENST00000346501 CYP7A1P22680 504 aa19.17■□□□□ 0.66
TSPAN4-201ENST00000346501 VGLL4Q14135 290 aa19.17■□□□□ 0.66
TSPAN4-201ENST00000346501 OPTNQ96CV9 577 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms