RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 SNAPC2Q13487 334 aa16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 KIF22Q14807 665 aa16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 NBPF11Q86T75 865 aa16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 FAM151AQ8WW52 585 aa16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 ZCCHC17Q9NP64 241 aaKnown RBP16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 DENND2AQ9ULE3 1009 aa16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 ZGPATQ8N5A5 531 aaKnown RBP16.24■□□□□ 0.19
NECTIN1-203ENST00000341398 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
NECTIN1-203ENST00000341398 PPATQ06203 517 aa16.23■□□□□ 0.19
NECTIN1-203ENST00000341398 PPIL2Q13356 520 aa16.23■□□□□ 0.19
NECTIN1-203ENST00000341398 ZKSCAN4Q969J2 545 aaPredicted RBP16.23■□□□□ 0.19
NECTIN1-203ENST00000341398 TMEM106CQ9BVX2 250 aa16.23■□□□□ 0.19
NECTIN1-203ENST00000341398 LRRFIP2Q9Y608 721 aaKnown RBP16.23■□□□□ 0.19
NECTIN1-203ENST00000341398 SNCAIPQ9Y6H5 919 aa16.23■□□□□ 0.19
NECTIN1-203ENST00000341398 MIGA2Q7L4E1 593 aa16.22■□□□□ 0.19
NECTIN1-203ENST00000341398 SLF2Q8IX21 1173 aa16.22■□□□□ 0.19
NECTIN1-203ENST00000341398 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
NECTIN1-203ENST00000341398 DAGLAQ9Y4D2 1042 aa16.22■□□□□ 0.19
NECTIN1-203ENST00000341398 IRF6O14896 467 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 TLR2O60603 784 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 GNAI3P08754 354 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 TCP10Q12799 353 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 CDC42EP5Q6NZY7 148 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 ARHGAP45Q92619 1136 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 COPRSQ9NQ92 184 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 USP40Q9NVE5 1235 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 AKAP2Q9Y2D5 859 aa16.21■□□□□ 0.19
NECTIN1-203ENST00000341398 KIAA0100Q14667 2235 aaKnown RBP16.21■□□□□ 0.18
NECTIN1-203ENST00000341398 SALL1Q9NSC2 1324 aa16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 GNRH1P01148 92 aa16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 PRDX5P30044 214 aa16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 DIXDC1Q155Q3 683 aa16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 SPTY2D1Q68D10 685 aaPredicted RBP16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 ARMC5Q96C12 935 aa16.2■□□□□ 0.18
NECTIN1-203ENST00000341398 BTBD19C9JJ37 291 aa16.19■□□□□ 0.18
NECTIN1-203ENST00000341398 ZBTB22O15209 634 aa16.19■□□□□ 0.18
NECTIN1-203ENST00000341398 SLC9C1Q4G0N8 1177 aa16.19■□□□□ 0.18
NECTIN1-203ENST00000341398 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
NECTIN1-203ENST00000341398 PA2G4Q9UQ80 394 aaKnown RBP16.19■□□□□ 0.18
NECTIN1-203ENST00000341398 INPP5BP32019 993 aa16.18■□□□□ 0.18
NECTIN1-203ENST00000341398 PHKA1P46020 1223 aa16.18■□□□□ 0.18
NECTIN1-203ENST00000341398 RARSP54136 660 aaKnown RBP16.18■□□□□ 0.18
NECTIN1-203ENST00000341398 PRMT2P55345 433 aa16.18■□□□□ 0.18
NECTIN1-203ENST00000341398 CCDC102BQ68D86 513 aa16.18■□□□□ 0.18
NECTIN1-203ENST00000341398 DZIP1Q86YF9 867 aaKnown RBP16.18■□□□□ 0.18
NECTIN1-203ENST00000341398 ZNF112Q9UJU3 913 aa16.18■□□□□ 0.18
NECTIN1-203ENST00000341398 RBBP6Q7Z6E9 1792 aaKnown RBP16.17■□□□□ 0.18
NECTIN1-203ENST00000341398 POTEFA5A3E0 1075 aa16.17■□□□□ 0.18
NECTIN1-203ENST00000341398 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
NECTIN1-203ENST00000341398 TIMM10P62072 90 aa16.17■□□□□ 0.18
NECTIN1-203ENST00000341398 ANKRD23Q86SG2 305 aa16.17■□□□□ 0.18
NECTIN1-203ENST00000341398 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.17■□□□□ 0.18
NECTIN1-203ENST00000341398 MEIS3Q99687 375 aa16.17■□□□□ 0.18
NECTIN1-203ENST00000341398 ABCF2Q9UG63 623 aa16.17■□□□□ 0.18
NECTIN1-203ENST00000341398 ENTPD3O75355 529 aa16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 HOXD10P28358 340 aa16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 LACTBP83111 547 aaPredicted RBP16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 NFIAQ12857 509 aa16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 MVPQ14764 893 aaKnown RBP16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 SLC4A8Q2Y0W8 1093 aa16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 ZSCAN29Q8IWY8 852 aaPredicted RBP16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 FAM198AQ9UFP1 575 aa16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 PDS5AQ29RF7 1337 aaKnown RBP16.16■□□□□ 0.18
NECTIN1-203ENST00000341398 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
NECTIN1-203ENST00000341398 GORABQ5T7V8 394 aa16.15■□□□□ 0.18
NECTIN1-203ENST00000341398 ZNF333Q96JL9 665 aa16.15■□□□□ 0.18
NECTIN1-203ENST00000341398 IDI2Q9BXS1 227 aa16.15■□□□□ 0.18
NECTIN1-203ENST00000341398 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
NECTIN1-203ENST00000341398 PTCH2Q9Y6C5 1203 aa16.15■□□□□ 0.18
NECTIN1-203ENST00000341398 A0A1B0GUL7 405 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 PDHXO00330 501 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 CXCL11O14625 94 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 ADORA1P30542 326 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 RGS3P49796 1198 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 ERICH6Q7L0X2 663 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 FAM163AQ96GL9 167 aaPredicted RBP16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 XAGE2Q96GT9 111 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 NEUROD6Q96NK8 337 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 PICK1Q9NRD5 415 aa16.14■□□□□ 0.17
NECTIN1-203ENST00000341398 GNAI2P04899 355 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 LDHCP07864 332 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 EN2P19622 333 aaPredicted RBP16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 TFCP2Q12800 502 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 G3BP1Q13283 466 aaKnown RBP eCLIP16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 MTX1Q13505 466 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 RASGRF1Q13972 1273 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 C17orf99Q6UX52 265 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 FASTKD5Q7L8L6 764 aaKnown RBP16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 GAKO14976 1311 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 CENPFP49454 3210 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 GSTO1P78417 241 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 CAP1Q01518 475 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 PARK7Q99497 189 aaKnown RBP16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 CPA4Q9UI42 421 aa16.13■□□□□ 0.17
NECTIN1-203ENST00000341398 HTTP42858 3142 aa16.12■□□□□ 0.17
NECTIN1-203ENST00000341398 DOCK2Q92608 1830 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms