RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 COBLO75128 1261 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-201ENST00000340437 ZNF532Q9HCE3 1301 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 CMA1P23946 247 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 CARD6Q9BX69 1037 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 PCDHA5Q9Y5H7 936 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 BTBD18B2RXH4 712 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 KARSQ15046 597 aaKnown RBP16.59■□□□□ 0.25
CPSF7-201ENST00000340437 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 PIH1D3Q9NQM4 214 aaKnown RBP16.59■□□□□ 0.25
CPSF7-201ENST00000340437 WWC3Q9ULE0 1092 aa16.59■□□□□ 0.25
CPSF7-201ENST00000340437 PHKA1P46020 1223 aa16.58■□□□□ 0.25
CPSF7-201ENST00000340437 SLC39A14Q15043 492 aa16.58■□□□□ 0.25
CPSF7-201ENST00000340437 CCDC102BQ68D86 513 aa16.58■□□□□ 0.25
CPSF7-201ENST00000340437 STX17P56962 302 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 NCAPHQ15003 741 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 DESI2Q9BSY9 194 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 TRMT112Q9UI30 125 aaKnown RBP16.58■□□□□ 0.24
CPSF7-201ENST00000340437 ASAP1Q9ULH1 1129 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 KIF13AQ9H1H9 1805 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 SEC31AO94979 1220 aaKnown RBP16.58■□□□□ 0.24
CPSF7-201ENST00000340437 ZFYP08048 801 aaPredicted RBP16.58■□□□□ 0.24
CPSF7-201ENST00000340437 MYL5Q02045 173 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 GRIN1Q05586 938 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 JMYQ8N9B5 988 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 KCNH3Q9ULD8 1083 aa16.58■□□□□ 0.24
CPSF7-201ENST00000340437 NUTM2BA6NNL0 878 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-201ENST00000340437 NUTM2EB1AL46 878 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-201ENST00000340437 GNG11P61952 73 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 TCIRG1Q13488 830 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 HLFQ16534 295 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 TEX35Q5T0J7 233 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 NUTM2AQ8IVF1 878 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-201ENST00000340437 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 NAPBQ9H115 298 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 GPR108Q9NPR9 543 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 OSBPL5Q9H0X9 879 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-201ENST00000340437 IMPACTQ9P2X3 320 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.57■□□□□ 0.244e-11■■□□□ 12.6
CPSF7-201ENST00000340437 LMO7Q8WWI1 1683 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 N4BP2Q86UW6 1770 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-201ENST00000340437 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
CPSF7-201ENST00000340437 POLR2DO15514 142 aaKnown RBP16.56■□□□□ 0.24
CPSF7-201ENST00000340437 AFMP43652 599 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 PDE4BQ07343 736 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 PRKAB2O43741 272 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 MAGEB6Q8N7X4 407 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.243e-9■■□□□ 13.7
CPSF7-201ENST00000340437 MINDY4BA8MYZ0 360 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 CASP1P29466 404 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 TDO2P48775 406 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 SSRP1Q08945 709 aaKnown RBP16.56■□□□□ 0.24
CPSF7-201ENST00000340437 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
CPSF7-201ENST00000340437 STAMQ92783 540 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 MTMR7Q9Y216 660 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 NEDD4P46934 1319 aa16.56■□□□□ 0.24
CPSF7-201ENST00000340437 SAFBQ15424 915 aaKnown RBP eCLIP16.55■□□□□ 0.24
CPSF7-201ENST00000340437 CDKL5O76039 1030 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 MBD4O95243 580 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 NR5A1Q13285 461 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 FOXP4Q8IVH2 680 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-201ENST00000340437 RFX7Q2KHR2 1363 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 ANKRD18BA2A2Z9 1011 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 KIF2AO00139 706 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-201ENST00000340437 CLCN6P51797 869 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 SYCP1Q15431 976 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 CCDC34Q96HJ3 373 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 SERTAD1Q9UHV2 236 aa16.55■□□□□ 0.24
CPSF7-201ENST00000340437 ADAMTS2O95450 1211 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 ETF1P62495 437 aaKnown RBP16.54■□□□□ 0.24
CPSF7-201ENST00000340437 METTL16Q86W50 562 aaKnown RBP16.54■□□□□ 0.24
CPSF7-201ENST00000340437 NBPF3Q9H094 633 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 ZNF446Q9NWS9 450 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 MORC2Q9Y6X9 1032 aaPredicted RBP16.54■□□□□ 0.24
CPSF7-201ENST00000340437 CBFA2T2O43439 604 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 KIF20AO95235 890 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 NFE2L3Q9Y4A8 694 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 RGPD5Q99666 1765 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 CIAO1O76071 339 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 PDE6AP16499 860 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 DIS3L2Q8IYB7 885 aaKnown RBP16.54■□□□□ 0.24
CPSF7-201ENST00000340437 ZSWIM5Q9P217 1185 aa16.54■□□□□ 0.24
CPSF7-201ENST00000340437 ZMYM6O95789 1325 aa16.53■□□□□ 0.24
CPSF7-201ENST00000340437 IRS4O14654 1257 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-201ENST00000340437 RANBP6O60518 1105 aaKnown RBP16.53■□□□□ 0.24
CPSF7-201ENST00000340437 TMCO3Q6UWJ1 677 aa16.53■□□□□ 0.24
CPSF7-201ENST00000340437 LZTFL1Q9NQ48 299 aa16.53■□□□□ 0.24
CPSF7-201ENST00000340437 SH2B2O14492 632 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-201ENST00000340437 ADD2P35612 726 aa16.53■□□□□ 0.24
CPSF7-201ENST00000340437 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
CPSF7-201ENST00000340437 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
CPSF7-201ENST00000340437 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
CPSF7-201ENST00000340437 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms