RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 CCDC158Q5M9N0 1113 aa17.95■□□□□ 0.46
ERCC1-203ENST00000340192 TTC39AQ5SRH9 613 aa17.95■□□□□ 0.46
ERCC1-203ENST00000340192 FAM83AQ86UY5 434 aa17.95■□□□□ 0.46
ERCC1-203ENST00000340192 ERC1Q8IUD2 1116 aa17.95■□□□□ 0.46
ERCC1-203ENST00000340192 EAF2Q96CJ1 260 aaPredicted RBP17.95■□□□□ 0.46
ERCC1-203ENST00000340192 CSRNP1Q96S65 589 aa17.95■□□□□ 0.46
ERCC1-203ENST00000340192 TLR7Q9NYK1 1049 aaKnown RBP17.95■□□□□ 0.46
ERCC1-203ENST00000340192 DBNLQ9UJU6 430 aaKnown RBP17.95■□□□□ 0.46
ERCC1-203ENST00000340192 AK9Q5TCS8 1911 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 HMMRO75330 724 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 IREB2P48200 963 aaKnown RBP17.94■□□□□ 0.46
ERCC1-203ENST00000340192 MECOMQ03112 1051 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 MKRN3Q13064 507 aaKnown RBP17.94■□□□□ 0.46
ERCC1-203ENST00000340192 HSP90AB4PQ58FF6 505 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 TBC1D9Q6ZT07 1266 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 ERICH6Q7L0X2 663 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 CLMNQ96JQ2 1002 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 CCDC8Q9H0W5 538 aaPredicted RBP17.94■□□□□ 0.46
ERCC1-203ENST00000340192 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.94■□□□□ 0.46
ERCC1-203ENST00000340192 MYO5AQ9Y4I1 1855 aaKnown RBP17.94■□□□□ 0.46
ERCC1-203ENST00000340192 GAKO14976 1311 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 LAMB1P07942 1786 aa17.94■□□□□ 0.46
ERCC1-203ENST00000340192 SLF2Q8IX21 1173 aa17.93■□□□□ 0.46
ERCC1-203ENST00000340192 SLC10A4Q96EP9 437 aa17.93■□□□□ 0.46
ERCC1-203ENST00000340192 SNRKQ9NRH2 765 aa17.93■□□□□ 0.46
ERCC1-203ENST00000340192 USP40Q9NVE5 1235 aa17.93■□□□□ 0.46
ERCC1-203ENST00000340192 MAST2Q6P0Q8 1798 aa17.93■□□□□ 0.46
ERCC1-203ENST00000340192 RPAP1Q9BWH6 1393 aaPredicted RBP17.92■□□□□ 0.46
ERCC1-203ENST00000340192 UNCXA6NJT0 531 aa17.92■□□□□ 0.46
ERCC1-203ENST00000340192 NFIAQ12857 509 aa17.92■□□□□ 0.46
ERCC1-203ENST00000340192 REM2Q8IYK8 340 aaPredicted RBP17.92■□□□□ 0.46
ERCC1-203ENST00000340192 RHPN1Q8TCX5 695 aa17.92■□□□□ 0.46
ERCC1-203ENST00000340192 ZNF384Q8TF68 577 aa17.92■□□□□ 0.46
ERCC1-203ENST00000340192 FAM163AQ96GL9 167 aaPredicted RBP17.92■□□□□ 0.46
ERCC1-203ENST00000340192 ZNF512BQ96KM6 892 aaPredicted RBP17.92■□□□□ 0.46
ERCC1-203ENST00000340192 MROH7-TTC4A0A0A0MT08 1334 aa17.92■□□□□ 0.46
ERCC1-203ENST00000340192 APBB1O00213 710 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 TCP10Q12799 353 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 SPRYD7Q5W111 196 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 AACSQ86V21 672 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 ANKRD13AQ8IZ07 590 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 TNS4Q8IZW8 715 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 FAM151AQ8WW52 585 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 NSUN4Q96CB9 384 aaKnown RBP17.91■□□□□ 0.46
ERCC1-203ENST00000340192 IL1RAPL2Q9NP60 686 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 RNF186Q9NXI6 227 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 SAGE1Q9NXZ1 904 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 RAI14Q9P0K7 980 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 LRP2BPQ9P2M1 347 aa17.91■□□□□ 0.46
ERCC1-203ENST00000340192 TRPA1O75762 1119 aa17.9■□□□□ 0.46
ERCC1-203ENST00000340192 BTDP43251 543 aa17.9■□□□□ 0.46
ERCC1-203ENST00000340192 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
ERCC1-203ENST00000340192 FAM198AQ9UFP1 575 aa17.9■□□□□ 0.46
ERCC1-203ENST00000340192 DOCK2Q92608 1830 aa17.9■□□□□ 0.46
ERCC1-203ENST00000340192 CYP2E1P05181 493 aaPredicted RBP17.89■□□□□ 0.45
ERCC1-203ENST00000340192 ZAP70P43403 619 aa17.89■□□□□ 0.45
ERCC1-203ENST00000340192 GSTO1P78417 241 aa17.89■□□□□ 0.45
ERCC1-203ENST00000340192 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.89■□□□□ 0.45
ERCC1-203ENST00000340192 HOOK2Q96ED9 719 aa17.89■□□□□ 0.45
ERCC1-203ENST00000340192 KIF1BPQ96EK5 621 aa17.89■□□□□ 0.45
ERCC1-203ENST00000340192 WNK4Q96J92 1243 aa17.89■□□□□ 0.45
ERCC1-203ENST00000340192 CASP8AP2Q9UKL3 1982 aa17.89■□□□□ 0.45
ERCC1-203ENST00000340192 GPR75-ASB3A0A0A6YYF3 556 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 RAB11FIP3O75154 756 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 LDHCP07864 332 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 ZBTB48P10074 688 aaPredicted RBP17.88■□□□□ 0.45
ERCC1-203ENST00000340192 TM4SF4P48230 202 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 RGS3P49796 1198 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 RRP1P56182 461 aaKnown RBP17.88■□□□□ 0.45
ERCC1-203ENST00000340192 ZFPM1Q8IX07 1006 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.88■□□□□ 0.45
ERCC1-203ENST00000340192 IDI2Q9BXS1 227 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 ELP3Q9H9T3 547 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 RFX7Q2KHR2 1363 aa17.88■□□□□ 0.45
ERCC1-203ENST00000340192 MAP3K9P80192 1104 aa17.87■□□□□ 0.45
ERCC1-203ENST00000340192 SREBF2Q12772 1141 aa17.87■□□□□ 0.45
ERCC1-203ENST00000340192 VGLL4Q14135 290 aa17.87■□□□□ 0.45
ERCC1-203ENST00000340192 DCAF15Q66K64 600 aa17.87■□□□□ 0.45
ERCC1-203ENST00000340192 MIGA2Q7L4E1 593 aa17.87■□□□□ 0.45
ERCC1-203ENST00000340192 CLASRPQ8N2M8 674 aaKnown RBP17.87■□□□□ 0.45
ERCC1-203ENST00000340192 ENTPD3O75355 529 aa17.86■□□□□ 0.45
ERCC1-203ENST00000340192 WDHD1O75717 1129 aaPredicted RBP17.86■□□□□ 0.45
ERCC1-203ENST00000340192 GJA5P36382 358 aa17.86■□□□□ 0.45
ERCC1-203ENST00000340192 RHBDL3P58872 404 aa17.86■□□□□ 0.45
ERCC1-203ENST00000340192 WRNIP1Q96S55 665 aa17.86■□□□□ 0.45
ERCC1-203ENST00000340192 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
ERCC1-203ENST00000340192 DDX4Q9NQI0 724 aaKnown RBP17.86■□□□□ 0.45
ERCC1-203ENST00000340192 PIH1D3Q9NQM4 214 aaKnown RBP17.86■□□□□ 0.45
ERCC1-203ENST00000340192 CSADQ9Y600 493 aa17.86■□□□□ 0.45
ERCC1-203ENST00000340192 NDUFB9Q9Y6M9 179 aa17.86■□□□□ 0.45
ERCC1-203ENST00000340192 CDK5RAP2Q96SN8 1893 aa17.86■□□□□ 0.45
ERCC1-203ENST00000340192 MANSC4A6NHS7 340 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-203ENST00000340192 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
ERCC1-203ENST00000340192 PICALMQ13492 652 aa17.85■□□□□ 0.45
ERCC1-203ENST00000340192 NAA16Q6N069 864 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-203ENST00000340192 ZKSCAN4Q969J2 545 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-203ENST00000340192 OPTNQ96CV9 577 aa17.85■□□□□ 0.45
ERCC1-203ENST00000340192 ZNF341Q9BYN7 854 aa17.85■□□□□ 0.45
ERCC1-203ENST00000340192 FOCADQ5VW36 1801 aa17.84■□□□□ 0.45
ERCC1-203ENST00000340192 CNKSR2Q8WXI2 1034 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms