RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 NOL10Q9BSC4 688 aaKnown RBP18.09■□□□□ 0.49
CLRN1-203ENST00000328863 FOCADQ5VW36 1801 aa18.09■□□□□ 0.49
CLRN1-203ENST00000328863 RFX7Q2KHR2 1363 aa18.08■□□□□ 0.49
CLRN1-203ENST00000328863 LDHCP07864 332 aa18.08■□□□□ 0.48
CLRN1-203ENST00000328863 BTDP43251 543 aa18.08■□□□□ 0.48
CLRN1-203ENST00000328863 ZAP70P43403 619 aa18.08■□□□□ 0.48
CLRN1-203ENST00000328863 VEGFBP49765 207 aa18.08■□□□□ 0.48
CLRN1-203ENST00000328863 GRM1Q13255 1194 aa18.08■□□□□ 0.48
CLRN1-203ENST00000328863 TBC1D9Q6ZT07 1266 aa18.08■□□□□ 0.48
CLRN1-203ENST00000328863 FAM83AQ86UY5 434 aa18.08■□□□□ 0.48
CLRN1-203ENST00000328863 NSUN4Q96CB9 384 aaKnown RBP18.08■□□□□ 0.48
CLRN1-203ENST00000328863 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.48
CLRN1-203ENST00000328863 CDK5RAP2Q96SN8 1893 aa18.07■□□□□ 0.48
CLRN1-203ENST00000328863 WDR33Q9C0J8 1336 aaKnown RBP18.07■□□□□ 0.48
CLRN1-203ENST00000328863 PPP1R12BO60237 982 aaPredicted RBP18.07■□□□□ 0.48
CLRN1-203ENST00000328863 CYP2E1P05181 493 aaPredicted RBP18.07■□□□□ 0.48
CLRN1-203ENST00000328863 CACNB3P54284 484 aa18.07■□□□□ 0.48
CLRN1-203ENST00000328863 HDAC1Q13547 482 aaPredicted RBP18.07■□□□□ 0.48
CLRN1-203ENST00000328863 TTF1Q15361 905 aaPredicted RBP18.07■□□□□ 0.48
CLRN1-203ENST00000328863 NAA16Q6N069 864 aaPredicted RBP18.07■□□□□ 0.48
CLRN1-203ENST00000328863 CYP4F22Q6NT55 531 aa18.07■□□□□ 0.48
CLRN1-203ENST00000328863 RGMBQ6NW40 437 aa18.07■□□□□ 0.48
CLRN1-203ENST00000328863 CDC42EP5Q6NZY7 148 aa18.07■□□□□ 0.48
CLRN1-203ENST00000328863 HOOK2Q96ED9 719 aa18.07■□□□□ 0.48
CLRN1-203ENST00000328863 FAM163AQ96GL9 167 aaPredicted RBP18.07■□□□□ 0.48
CLRN1-203ENST00000328863 TMED8Q6PL24 325 aaPredicted RBP18.06■□□□□ 0.48
CLRN1-203ENST00000328863 LAMB1P07942 1786 aa18.06■□□□□ 0.48
CLRN1-203ENST00000328863 SMARCA5O60264 1052 aaPredicted RBP18.05■□□□□ 0.48
CLRN1-203ENST00000328863 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
CLRN1-203ENST00000328863 MAP4K4O95819 1239 aaPredicted RBP18.05■□□□□ 0.48
CLRN1-203ENST00000328863 MAP3K12Q12852 859 aa18.05■□□□□ 0.48
CLRN1-203ENST00000328863 GCC1Q96CN9 775 aa18.05■□□□□ 0.48
CLRN1-203ENST00000328863 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
CLRN1-203ENST00000328863 TMEM39BQ9GZU3 492 aa18.05■□□□□ 0.48
CLRN1-203ENST00000328863 USP40Q9NVE5 1235 aa18.05■□□□□ 0.48
CLRN1-203ENST00000328863 ANGEL1Q9UNK9 670 aaKnown RBP18.05■□□□□ 0.48
CLRN1-203ENST00000328863 GPR75-ASB3A0A0A6YYF3 556 aa18.04■□□□□ 0.48
CLRN1-203ENST00000328863 ZNF157P51786 506 aaPredicted RBP18.04■□□□□ 0.48
CLRN1-203ENST00000328863 NOGQ13253 232 aa18.04■□□□□ 0.48
CLRN1-203ENST00000328863 PRKG1Q13976 671 aa18.04■□□□□ 0.48
CLRN1-203ENST00000328863 NBPF12Q5TAG4 269 aaPredicted RBP18.04■□□□□ 0.48
CLRN1-203ENST00000328863 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
CLRN1-203ENST00000328863 CCDC102AQ96A19 550 aa18.04■□□□□ 0.48
CLRN1-203ENST00000328863 PIH1D3Q9NQM4 214 aaKnown RBP18.04■□□□□ 0.48
CLRN1-203ENST00000328863 NAV1Q8NEY1 1877 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 COL2A1P02458 1487 aaPredicted RBP18.03■□□□□ 0.48
CLRN1-203ENST00000328863 PCNTO95613 3336 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 BAG3O95817 575 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 SLC10A3P09131 477 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 PLCG2P16885 1265 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 IREB2P48200 963 aaKnown RBP18.03■□□□□ 0.48
CLRN1-203ENST00000328863 MAP3K11Q16584 847 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 CERS3Q8IU89 383 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 ZNF384Q8TF68 577 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 FAM151AQ8WW52 585 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 TEPSINQ96N21 525 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 IDI2Q9BXS1 227 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 ECHDC1Q9NTX5 307 aa18.03■□□□□ 0.48
CLRN1-203ENST00000328863 ENTPD3O75355 529 aa18.02■□□□□ 0.48
CLRN1-203ENST00000328863 ATP5JP18859 108 aa18.02■□□□□ 0.48
CLRN1-203ENST00000328863 NFIAQ12857 509 aa18.02■□□□□ 0.48
CLRN1-203ENST00000328863 DCAF15Q66K64 600 aa18.02■□□□□ 0.48
CLRN1-203ENST00000328863 MOB2Q70IA6 237 aa18.02■□□□□ 0.48
CLRN1-203ENST00000328863 RASAL3Q86YV0 1011 aa18.02■□□□□ 0.48
CLRN1-203ENST00000328863 NDUFB9Q9Y6M9 179 aa18.02■□□□□ 0.48
CLRN1-203ENST00000328863 UNCXA6NJT0 531 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 UBE2Q2LH0YL09 131 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 GOLIM4O00461 696 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 MAP2K2P36507 400 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 RGS3P49796 1198 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 MAP2K1Q02750 393 aaPredicted RBP18.01■□□□□ 0.47
CLRN1-203ENST00000328863 TCP10Q12799 353 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 CDAN1Q8IWY9 1227 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 MAGEB6Q8N7X4 407 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 AIDAQ96BJ3 306 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 BOLA2Q9H3K6 86 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 RWDD1Q9H446 243 aaPredicted RBP18.01■□□□□ 0.47
CLRN1-203ENST00000328863 ANTXR1Q9H6X2 564 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
CLRN1-203ENST00000328863 HSPA1AP0DMV8 641 aaKnown RBP18■□□□□ 0.47
CLRN1-203ENST00000328863 HSPA1BP0DMV9 641 aaKnown RBP18■□□□□ 0.47
CLRN1-203ENST00000328863 CYP7A1P22680 504 aa18■□□□□ 0.47
CLRN1-203ENST00000328863 RHBDL3P58872 404 aa18■□□□□ 0.47
CLRN1-203ENST00000328863 PICALMQ13492 652 aa18■□□□□ 0.47
CLRN1-203ENST00000328863 TEX11Q8IYF3 940 aa18■□□□□ 0.47
CLRN1-203ENST00000328863 ANKRD13AQ8IZ07 590 aa18■□□□□ 0.47
CLRN1-203ENST00000328863 HAUS7Q99871 368 aa18■□□□□ 0.47
CLRN1-203ENST00000328863 DDX24Q9GZR7 859 aaKnown RBP eCLIP18■□□□□ 0.47
CLRN1-203ENST00000328863 AATFQ9NY61 560 aaKnown RBP eCLIP18■□□□□ 0.47
CLRN1-203ENST00000328863 FAM198AQ9UFP1 575 aa18■□□□□ 0.47
CLRN1-203ENST00000328863 DDX60LQ5H9U9 1706 aaKnown RBP18■□□□□ 0.47
CLRN1-203ENST00000328863 TTC41PQ6P2S7 1318 aa17.99■□□□□ 0.47
CLRN1-203ENST00000328863 DOCK1Q14185 1865 aa17.99■□□□□ 0.47
CLRN1-203ENST00000328863 FAM155AB1AL88 458 aaPredicted RBP17.99■□□□□ 0.47
CLRN1-203ENST00000328863 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
CLRN1-203ENST00000328863 WDHD1O75717 1129 aaPredicted RBP17.99■□□□□ 0.47
CLRN1-203ENST00000328863 ZSCAN29Q8IWY8 852 aaPredicted RBP17.99■□□□□ 0.47
CLRN1-203ENST00000328863 BEGAINQ9BUH8 593 aa17.99■□□□□ 0.47
CLRN1-203ENST00000328863 FZD1Q9UP38 647 aa17.99■□□□□ 0.47
CLRN1-203ENST00000328863 ATRNL1Q5VV63 1379 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms