RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 SPNS2Q8IVW8 549 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 DCTPP1Q9H773 170 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.17□□□□□ -1.74
GEN1-201ENST00000317402 SWAP70Q9UH65 585 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 TNCP24821 2201 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 ANKRD31Q8N7Z5 1873 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 TMEM131LA2VDJ0 1609 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 GOLGA6L10A0A0M3HER8 536 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 N4BP1O75113 896 aaKnown RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 FKBP4Q02790 459 aaKnown RBP eCLIP4.17□□□□□ -1.74
GEN1-201ENST00000317402 CPLX3Q8WVH0 158 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 FAM84AQ96KN4 292 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 LUC7LQ9NQ29 371 aaKnown RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 RNF225M0QZC1 329 aaPredicted RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 ZMYND10O75800 440 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 KLRK1P26718 216 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 TERF1P54274 439 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 TEFQ10587 303 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 GBP6Q6ZN66 633 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 NBPF5PQ86XG9 351 aaPredicted RBP4.17□□□□□ -1.74
GEN1-201ENST00000317402 HOMER1Q86YM7 354 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 DIP2BQ9P265 1576 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 FER1L4A9Z1Z3 1794 aa4.17□□□□□ -1.74
GEN1-201ENST00000317402 NALCNQ8IZF0 1738 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 LOC102724159A0A0B4J2E5 919 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 PWP2Q15269 919 aaKnown RBP4.16□□□□□ -1.74
GEN1-201ENST00000317402 KRT222Q8N1A0 295 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 POLR3GO15318 223 aaPredicted RBP4.16□□□□□ -1.74
GEN1-201ENST00000317402 IGKV5-2P06315 115 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 C3orf67Q6ZVT6 689 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 ANKRD44Q8N8A2 993 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 CACTINQ8WUQ7 758 aaKnown RBP4.16□□□□□ -1.74
GEN1-201ENST00000317402 PHF8Q9UPP1 1060 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 MAPK8IP1Q9UQF2 711 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 GCP02774 474 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 MX1P20591 662 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 ANO6Q4KMQ2 910 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 CBX8Q9HC52 389 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 DACT1Q9NYF0 836 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 CRB1P82279 1406 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 CACNA1HO95180 2353 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 SALL3Q9BXA9 1300 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 DBN1Q16643 649 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 RNF168Q8IYW5 571 aaPredicted RBP4.16□□□□□ -1.74
GEN1-201ENST00000317402 CWC22Q9HCG8 908 aaKnown RBP4.16□□□□□ -1.74
GEN1-201ENST00000317402 RAD21O60216 631 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 NUP133Q8WUM0 1156 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 HPS3Q969F9 1004 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 CDK12Q9NYV4 1490 aaPredicted RBP4.16□□□□□ -1.74
GEN1-201ENST00000317402 GNAT3A8MTJ3 354 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 POLD1P28340 1107 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 TMEM132AQ24JP5 1023 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.16□□□□□ -1.743e-6■■■■■ 28.8
GEN1-201ENST00000317402 ZNF446Q9NWS9 450 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 LMO7Q8WWI1 1683 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 KIF1AQ12756 1690 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 FOXP2O15409 715 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 RHPN1Q8TCX5 695 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 ADGRB1O14514 1584 aa4.16□□□□□ -1.74
GEN1-201ENST00000317402 NMT2O60551 498 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 ATP6V1AP38606 617 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 KARSQ15046 597 aaKnown RBP4.15□□□□□ -1.74
GEN1-201ENST00000317402 UBAP2Q5T6F2 1119 aaKnown RBP4.15□□□□□ -1.74
GEN1-201ENST00000317402 MICALCLQ6ZW33 695 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 IRAK4Q9NWZ3 460 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 TCEAL9Q9UHQ7 104 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 RBM8AQ9Y5S9 174 aaKnown RBP4.15□□□□□ -1.74
GEN1-201ENST00000317402 MKI67P46013 3256 aaKnown RBP4.15□□□□□ -1.74
GEN1-201ENST00000317402 ADGRL3Q9HAR2 1447 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 EYSQ5T1H1 3165 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 REC8O95072 547 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 DESI2Q9BSY9 194 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 MTMR6Q9Y217 621 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 SH3BGRP55822 239 aaPredicted RBP4.15□□□□□ -1.74
GEN1-201ENST00000317402 EVA1CP58658 441 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 SNAP25P60880 206 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 CEP135Q66GS9 1140 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 CPLX2Q6PUV4 134 aaKnown RBP4.15□□□□□ -1.74
GEN1-201ENST00000317402 MIGA1Q8NAN2 632 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 MIPOL1Q8TD10 442 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 CALR3Q96L12 384 aaKnown RBP4.15□□□□□ -1.74
GEN1-201ENST00000317402 PDILTQ8N807 584 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 NEK11Q8NG66 645 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 OXER1Q8TDS5 423 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 ZNF496Q96IT1 587 aaPredicted RBP4.15□□□□□ -1.74
GEN1-201ENST00000317402 GOPCQ9HD26 462 aa4.15□□□□□ -1.74
GEN1-201ENST00000317402 TOPAZ1Q8N9V7 1692 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 STX17P56962 302 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 ST5P78524 1137 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 NKX1-1Q15270 411 aaPredicted RBP4.15□□□□□ -1.75
GEN1-201ENST00000317402 RNF14Q9UBS8 474 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 KCNJ14Q9UNX9 436 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 DOCK4Q8N1I0 1966 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 FAM208BQ5VWN6 2430 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 RNF20Q5VTR2 975 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 FAM219BQ5XKK7 198 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 TMED8Q6PL24 325 aaPredicted RBP4.15□□□□□ -1.75
GEN1-201ENST00000317402 NRKQ7Z2Y5 1582 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 RASSF8Q8NHQ8 419 aa4.15□□□□□ -1.75
GEN1-201ENST00000317402 HCFC1P51610 2035 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms