RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 BICC1Q9H694 974 aaKnown RBP7.61□□□□□ -1.19
ZNF540-201ENST00000316433 PDE11AQ9HCR9 933 aa7.61□□□□□ -1.19
ZNF540-201ENST00000316433 FAN1Q9Y2M0 1017 aa7.61□□□□□ -1.19
ZNF540-201ENST00000316433 PYGLP06737 847 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 ARID5BQ14865 1188 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 LONRF2Q1L5Z9 754 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 RABL6Q3YEC7 729 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-201ENST00000316433 HHATQ5VTY9 493 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 C16orf71Q8IYS4 520 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-201ENST00000316433 KCNH5Q8NCM2 988 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 ACRBPQ8NEB7 543 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 IRX2Q9BZI1 471 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-201ENST00000316433 LMCD1Q9NZU5 365 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 BLOC1S6Q9UL45 172 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 PALD1Q9ULE6 856 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 FAM169AQ9Y6X4 670 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 A0A1B0GUL6 1792 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 BCORQ6W2J9 1755 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 RGPD5Q99666 1765 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 C1orf167Q5SNV9 1468 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 INPP5BP32019 993 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 DDX46Q7L014 1031 aaKnown RBP7.6□□□□□ -1.19
ZNF540-201ENST00000316433 ZNF396Q96N95 335 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-201ENST00000316433 RMI1Q9H9A7 625 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 CBX8Q9HC52 389 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 CNPY2Q9Y2B0 182 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 CCDC69A6NI79 296 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 SKAP2O75563 359 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-201ENST00000316433 UBTFL1P0CB47 393 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-201ENST00000316433 PDIA5Q14554 519 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 CDCA2Q69YH5 1023 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-201ENST00000316433 BICD2Q8TD16 824 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 CLSTN2Q9H4D0 955 aa7.6□□□□□ -1.19
ZNF540-201ENST00000316433 SETD1BQ9UPS6 1966 aaKnown RBP7.59□□□□□ -1.19
ZNF540-201ENST00000316433 ZMYM6O95789 1325 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 PNMA6EA0A0J9YXQ4 647 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 FRMD3A2A2Y4 597 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 FAM83GA6ND36 823 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 SYT1P21579 422 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 PEX19P40855 299 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 TYRO3Q06418 890 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 RBM12BQ8IXT5 1001 aaKnown RBP7.59□□□□□ -1.19
ZNF540-201ENST00000316433 PROCA1Q8NCQ7 364 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-201ENST00000316433 SAAL1Q96ER3 474 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 EPC1Q9H2F5 836 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 IMPACTQ9P2X3 320 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 PHLPP2Q6ZVD8 1323 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 MYH3P11055 1940 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 ATP2B2Q01814 1243 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 ST3GAL1Q11201 340 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 LRRFIP1Q32MZ4 808 aaKnown RBP7.59□□□□□ -1.19
ZNF540-201ENST00000316433 KIAA1328Q86T90 577 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 MYLK4Q86YV6 388 aaPredicted RBP7.59□□□□□ -1.19
ZNF540-201ENST00000316433 IL17REQ8NFR9 667 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 PPP1R13BQ96KQ4 1090 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 CARD6Q9BX69 1037 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 HOMER3Q9NSC5 361 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 ECHDC1Q9NTX5 307 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 PHF8Q9UPP1 1060 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 CAPN7Q9Y6W3 813 aa7.59□□□□□ -1.19
ZNF540-201ENST00000316433 KCPQ6ZWJ8 1503 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 PXDNQ92626 1479 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 CCDC151A5D8V7 595 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 TPD52L2O43399 206 aaKnown RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 OATP04181 439 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 NAA25Q14CX7 972 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 G2E3Q7L622 706 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 AMOTL1Q8IY63 956 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 SPDYE1Q8NFV5 336 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 PLEKHG4BQ96PX9 1271 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 CPDO75976 1380 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 BCL9LQ86UU0 1499 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 CHD4Q14839 1912 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 EBAG9O00559 213 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 PYGBP11216 843 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 MYSM1Q5VVJ2 828 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 ISM2Q6H9L7 571 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 RCSD1Q6JBY9 416 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 FAM71BQ8TC56 605 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 CLIC6Q96NY7 704 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 PARD6BQ9BYG5 372 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 COPRSQ9NQ92 184 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 DNAI1Q9UI46 699 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 IQSEC3Q9UPP2 1182 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 N4BP1O75113 896 aaKnown RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 AK2P54819 239 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 SLC8A3P57103 927 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 MCM6Q14566 821 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 RRS1Q15050 365 aaKnown RBP7.58□□□□□ -1.2
ZNF540-201ENST00000316433 BRD3Q15059 726 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 MAP3K11Q16584 847 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 ANO6Q4KMQ2 910 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 HSP90AB2PQ58FF8 381 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 HDXQ7Z353 690 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 FCHSD1Q86WN1 690 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 SPDL1Q96EA4 605 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 XAGE2Q96GT9 111 aa7.58□□□□□ -1.2
ZNF540-201ENST00000316433 OSBPL5Q9H0X9 879 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms