RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FEZ2Q9UHY8 353 aaPredicted RBP14.18□□□□□ -0.14
USP38-201ENST00000307017 MSH6P52701 1360 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 GOLGA6CA6NDK9 693 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 GOLGA6DP0CG33 693 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 SAT1P21673 171 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 KIFC2Q96AC6 838 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 GOLGA6AQ9NYA3 693 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 CCDC61Q9Y6R9 512 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 BUB1O43683 1085 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 CIB2O75838 187 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 ANKLE2Q86XL3 938 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 JAKMIP2Q96AA8 810 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 SETDB1Q15047 1291 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 CCDC110Q8TBZ0 833 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 FAM227BQ96M60 508 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 SLF1Q9BQI6 1058 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 FERMT1Q9BQL6 677 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 CBX8Q9HC52 389 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.18□□□□□ -0.145e-11■■■■■ 108.1
USP38-201ENST00000307017 KCNJ14Q9UNX9 436 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.18□□□□□ -0.14
USP38-201ENST00000307017 LCA5Q86VQ0 697 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 DNAI2Q9GZS0 605 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 BAIAP2L1Q9UHR4 511 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 PLEKHH2Q8IVE3 1493 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 TXKP42681 527 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 SARNPP82979 210 aaKnown RBP14.17□□□□□ -0.14
USP38-201ENST00000307017 SH2D4BQ5SQS7 431 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 THEMISQ8N1K5 641 aaPredicted RBP14.17□□□□□ -0.14
USP38-201ENST00000307017 NCKAP5LQ9HCH0 1330 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 ARHGEF11O15085 1522 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 PDE4DQ08499 809 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 EIF4E1BA6NMX2 242 aaKnown RBP14.17□□□□□ -0.14
USP38-201ENST00000307017 LACTBP83111 547 aaPredicted RBP14.17□□□□□ -0.14
USP38-201ENST00000307017 METTL14Q9HCE5 456 aaKnown RBP14.17□□□□□ -0.14
USP38-201ENST00000307017 NIP7Q9Y221 180 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP38-201ENST00000307017 NEDD9Q14511 834 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 VPS52Q8N1B4 723 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 BANK1Q8NDB2 785 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 BAG2O95816 211 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 SEL1L2Q5TEA6 688 aa14.17□□□□□ -0.14
USP38-201ENST00000307017 MRPL50Q8N5N7 158 aaKnown RBP14.17□□□□□ -0.14
USP38-201ENST00000307017 BZW2Q9Y6E2 419 aaKnown RBP14.17□□□□□ -0.14
USP38-201ENST00000307017 A0A1B0GUL7 405 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 BACH1O14867 736 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 TIMM10P62072 90 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 ARHGAP44Q17R89 818 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 NOP9Q86U38 636 aaKnown RBP14.16□□□□□ -0.14
USP38-201ENST00000307017 ANO3Q9BYT9 981 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 ZMYND10O75800 440 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 DTHD1Q6ZMT9 781 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 RRP36Q96EU6 259 aaKnown RBP14.16□□□□□ -0.14
USP38-201ENST00000307017 GTPBP4Q9BZE4 634 aaKnown RBP14.16□□□□□ -0.14
USP38-201ENST00000307017 TTC21AQ8NDW8 1320 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 WDHD1O75717 1129 aaPredicted RBP14.16□□□□□ -0.14
USP38-201ENST00000307017 KRT83P78385 493 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 KRT23Q9C075 422 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 IFRD2Q12894 506 aaPredicted RBP14.16□□□□□ -0.14
USP38-201ENST00000307017 CASKIN1Q8WXD9 1431 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 SPDYE3A6NKU9 549 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 JAK2O60674 1132 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 INPP5BP32019 993 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 VAV2P52735 878 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 TYW1BQ6NUM6 668 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 C8orf74Q6P047 294 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 CDC37L1Q7L3B6 337 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 KRT28Q7Z3Y7 464 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 ESR2Q92731 530 aa14.16□□□□□ -0.14
USP38-201ENST00000307017 LUC7L2Q9Y383 392 aaKnown RBP14.16□□□□□ -0.14
USP38-201ENST00000307017 TAF5LO75529 589 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 WHAMMQ8TF30 809 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 DACT3Q96B18 629 aaPredicted RBP14.15□□□□□ -0.14
USP38-201ENST00000307017 ZNF408Q9H9D4 720 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 PPME1Q9Y570 386 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 MYCLP12524 364 aaPredicted RBP14.15□□□□□ -0.14
USP38-201ENST00000307017 IL1RL1Q01638 556 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 NCAPH2Q6IBW4 605 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 NFATC2IPQ8NCF5 419 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 EXOC5O00471 708 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 SEC31AO94979 1220 aaKnown RBP14.15□□□□□ -0.14
USP38-201ENST00000307017 CCDC77Q9BR77 488 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 CPSF2Q9P2I0 782 aaKnown RBP14.15□□□□□ -0.14
USP38-201ENST00000307017 CEP104O60308 925 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 CCT6BQ92526 530 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 CDC5LQ99459 802 aaKnown RBP14.15□□□□□ -0.14
USP38-201ENST00000307017 UTP11Q9Y3A2 253 aaKnown RBP14.15□□□□□ -0.14
USP38-201ENST00000307017 G2E3Q7L622 706 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 ERMNQ8TAM6 284 aa14.15□□□□□ -0.14
USP38-201ENST00000307017 TCP10Q12799 353 aa14.14□□□□□ -0.15
USP38-201ENST00000307017 PPP2R5AQ15172 486 aa14.14□□□□□ -0.15
USP38-201ENST00000307017 STIM2Q9P246 746 aa14.14□□□□□ -0.15
USP38-201ENST00000307017 SDCCAG8Q86SQ7 713 aaPredicted RBP14.14□□□□□ -0.15
USP38-201ENST00000307017 RILPQ96NA2 401 aa14.14□□□□□ -0.15
USP38-201ENST00000307017 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
USP38-201ENST00000307017 PIK3R4Q99570 1358 aa14.14□□□□□ -0.15
USP38-201ENST00000307017 NBPF7P0C2Y1 421 aaPredicted RBP14.14□□□□□ -0.15
USP38-201ENST00000307017 NXNQ6DKJ4 435 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms