RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 UBE2Q2LH0YL09 131 aa14.74□□□□□ -0.05
HMGB2-201ENST00000296503 NBPF12Q5TAG4 269 aaPredicted RBP14.74□□□□□ -0.05
HMGB2-201ENST00000296503 CDC42EP5Q6NZY7 148 aa14.74□□□□□ -0.05
HMGB2-201ENST00000296503 ARMC9Q7Z3E5 817 aa14.74□□□□□ -0.05
HMGB2-201ENST00000296503 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
HMGB2-201ENST00000296503 HHIPL1Q96JK4 782 aa14.74□□□□□ -0.05
HMGB2-201ENST00000296503 ECM29Q5VYK3 1845 aa14.73□□□□□ -0.05
HMGB2-201ENST00000296503 ZNF157P51786 506 aaPredicted RBP14.73□□□□□ -0.05
HMGB2-201ENST00000296503 RGMBQ6NW40 437 aa14.73□□□□□ -0.05
HMGB2-201ENST00000296503 NSUN4Q96CB9 384 aaKnown RBP14.73□□□□□ -0.05
HMGB2-201ENST00000296503 FAM163AQ96GL9 167 aaPredicted RBP14.73□□□□□ -0.05
HMGB2-201ENST00000296503 TMEM39BQ9GZU3 492 aa14.73□□□□□ -0.05
HMGB2-201ENST00000296503 NDUFB9Q9Y6M9 179 aa14.73□□□□□ -0.05
HMGB2-201ENST00000296503 PPP1R12BO60237 982 aaPredicted RBP14.72□□□□□ -0.05
HMGB2-201ENST00000296503 FKBP1CQ5VVH2 108 aa14.72□□□□□ -0.05
HMGB2-201ENST00000296503 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
HMGB2-201ENST00000296503 ZBTB47Q9UFB7 747 aaPredicted RBP14.72□□□□□ -0.05
HMGB2-201ENST00000296503 ANGEL1Q9UNK9 670 aaKnown RBP14.72□□□□□ -0.05
HMGB2-201ENST00000296503 MROH7-TTC4A0A0A0MT08 1334 aa14.72□□□□□ -0.05
HMGB2-201ENST00000296503 BTDP43251 543 aa14.72□□□□□ -0.05
HMGB2-201ENST00000296503 NAA16Q6N069 864 aaPredicted RBP14.72□□□□□ -0.05
HMGB2-201ENST00000296503 NOL10Q9BSC4 688 aaKnown RBP14.72□□□□□ -0.05
HMGB2-201ENST00000296503 PIH1D3Q9NQM4 214 aaKnown RBP14.72□□□□□ -0.05
HMGB2-201ENST00000296503 FZD1Q9UP38 647 aa14.72□□□□□ -0.05
HMGB2-201ENST00000296503 MYH2Q9UKX2 1941 aa14.71□□□□□ -0.05
HMGB2-201ENST00000296503 GAKO14976 1311 aa14.71□□□□□ -0.05
HMGB2-201ENST00000296503 IDH1O75874 414 aaKnown RBP14.71□□□□□ -0.05
HMGB2-201ENST00000296503 IRX6P78412 446 aaPredicted RBP14.71□□□□□ -0.05
HMGB2-201ENST00000296503 TCP10Q12799 353 aa14.71□□□□□ -0.05
HMGB2-201ENST00000296503 FAM83AQ86UY5 434 aa14.71□□□□□ -0.05
HMGB2-201ENST00000296503 ZNF384Q8TF68 577 aa14.71□□□□□ -0.05
HMGB2-201ENST00000296503 CCDC102AQ96A19 550 aa14.71□□□□□ -0.05
HMGB2-201ENST00000296503 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
HMGB2-201ENST00000296503 GPR75-ASB3A0A0A6YYF3 556 aa14.7□□□□□ -0.06
HMGB2-201ENST00000296503 AOC2O75106 756 aa14.7□□□□□ -0.06
HMGB2-201ENST00000296503 BOLA2Q9H3K6 86 aa14.7□□□□□ -0.06
HMGB2-201ENST00000296503 ANTXR1Q9H6X2 564 aa14.7□□□□□ -0.06
HMGB2-201ENST00000296503 AKAP11Q9UKA4 1901 aa14.7□□□□□ -0.06
HMGB2-201ENST00000296503 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.69□□□□□ -0.064e-39■□□□□ 10.3
HMGB2-201ENST00000296503 FAM151AQ8WW52 585 aa14.69□□□□□ -0.06
HMGB2-201ENST00000296503 TEPSINQ96N21 525 aa14.69□□□□□ -0.06
HMGB2-201ENST00000296503 RWDD1Q9H446 243 aaPredicted RBP14.69□□□□□ -0.06
HMGB2-201ENST00000296503 USP2O75604 605 aaPredicted RBP14.69□□□□□ -0.06
HMGB2-201ENST00000296503 ATP5JP18859 108 aa14.69□□□□□ -0.06
HMGB2-201ENST00000296503 MAP2K2P36507 400 aa14.69□□□□□ -0.06
HMGB2-201ENST00000296503 IREB2P48200 963 aaKnown RBP14.69□□□□□ -0.06
HMGB2-201ENST00000296503 MAP3K12Q12852 859 aa14.69□□□□□ -0.06
HMGB2-201ENST00000296503 NFIAQ12857 509 aa14.69□□□□□ -0.06
HMGB2-201ENST00000296503 HDAC1Q13547 482 aaPredicted RBP14.69□□□□□ -0.06
HMGB2-201ENST00000296503 TTF1Q15361 905 aaPredicted RBP14.69□□□□□ -0.06
HMGB2-201ENST00000296503 ANKRD45Q5TZF3 282 aa14.69□□□□□ -0.06
HMGB2-201ENST00000296503 CDAN1Q8IWY9 1227 aa14.69□□□□□ -0.06
HMGB2-201ENST00000296503 GOLIM4O00461 696 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 IGSF3O75054 1194 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 BAG3O95817 575 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 CYP7A1P22680 504 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 NOGQ13253 232 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 PICALMQ13492 652 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 GCC1Q96CN9 775 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 HOOK2Q96ED9 719 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 GPATCH3Q96I76 525 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 FAM198AQ9UFP1 575 aa14.68□□□□□ -0.06
HMGB2-201ENST00000296503 RGS3P49796 1198 aa14.67□□□□□ -0.06
HMGB2-201ENST00000296503 MAP2K1Q02750 393 aaPredicted RBP14.67□□□□□ -0.06
HMGB2-201ENST00000296503 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
HMGB2-201ENST00000296503 MAGEB6Q8N7X4 407 aa14.67□□□□□ -0.06
HMGB2-201ENST00000296503 SLC10A4Q96EP9 437 aa14.67□□□□□ -0.06
HMGB2-201ENST00000296503 IDI2Q9BXS1 227 aa14.67□□□□□ -0.06
HMGB2-201ENST00000296503 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
HMGB2-201ENST00000296503 AATFQ9NY61 560 aaKnown RBP eCLIP14.67□□□□□ -0.06
HMGB2-201ENST00000296503 PAPPA2Q9BXP8 1791 aa14.67□□□□□ -0.06
HMGB2-201ENST00000296503 LDLRAD1Q5T700 205 aa14.67□□□□□ -0.06
HMGB2-201ENST00000296503 ZFPM1Q8IX07 1006 aa14.67□□□□□ -0.06
HMGB2-201ENST00000296503 FAM155AB1AL88 458 aaPredicted RBP14.66□□□□□ -0.06
HMGB2-201ENST00000296503 ENTPD3O75355 529 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 MAP4K4O95819 1239 aaPredicted RBP14.66□□□□□ -0.06
HMGB2-201ENST00000296503 SLC10A3P09131 477 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 HSPA1AP0DMV8 641 aaKnown RBP14.66□□□□□ -0.06
HMGB2-201ENST00000296503 HSPA1BP0DMV9 641 aaKnown RBP14.66□□□□□ -0.06
HMGB2-201ENST00000296503 RHBDL3P58872 404 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 MAP3K11Q16584 847 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 MIGA2Q7L4E1 593 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 TEX11Q8IYF3 940 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 AIDAQ96BJ3 306 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 EDC3Q96F86 508 aaKnown RBP14.66□□□□□ -0.06
HMGB2-201ENST00000296503 BEGAINQ9BUH8 593 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 PAG1Q9NWQ8 432 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 AK9Q5TCS8 1911 aa14.66□□□□□ -0.06
HMGB2-201ENST00000296503 WDHD1O75717 1129 aaPredicted RBP14.65□□□□□ -0.06
HMGB2-201ENST00000296503 PLCG2P16885 1265 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 KIF23Q02241 960 aaPredicted RBP14.65□□□□□ -0.06
HMGB2-201ENST00000296503 DCAF15Q66K64 600 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 RASAL3Q86YV0 1011 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 ANKRD13AQ8IZ07 590 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 SH3RF3Q8TEJ3 882 aaPredicted RBP14.65□□□□□ -0.06
HMGB2-201ENST00000296503 ZIC5Q96T25 663 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 HAUS7Q99871 368 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 MYO5AQ9Y4I1 1855 aaKnown RBP14.65□□□□□ -0.06
HMGB2-201ENST00000296503 SSC5DA1L4H1 1573 aa14.65□□□□□ -0.06
HMGB2-201ENST00000296503 PPP4CP60510 307 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms