RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNF8-201ENST00000290330 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
SNF8-201ENST00000290330 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
SNF8-201ENST00000290330 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
SNF8-201ENST00000290330 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNF8-201ENST00000290330 VGLL4Q14135 290 aa12.94□□□□□ -0.34
SNF8-201ENST00000290330 POLA2Q14181 598 aa12.94□□□□□ -0.34
SNF8-201ENST00000290330 MVPQ14764 893 aaKnown RBP12.94□□□□□ -0.34
SNF8-201ENST00000290330 ZGPATQ8N5A5 531 aaKnown RBP12.94□□□□□ -0.34
SNF8-201ENST00000290330 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
SNF8-201ENST00000290330 R3HDMLQ9H3Y0 253 aa12.94□□□□□ -0.34
SNF8-201ENST00000290330 ATP8B2P98198 1209 aa12.93□□□□□ -0.34
SNF8-201ENST00000290330 NFIAQ12857 509 aa12.93□□□□□ -0.34
SNF8-201ENST00000290330 CTU1Q7Z7A3 348 aaKnown RBP12.93□□□□□ -0.34
SNF8-201ENST00000290330 ITPRIPQ8IWB1 547 aa12.93□□□□□ -0.34
SNF8-201ENST00000290330 SSH3Q8TE77 659 aa12.93□□□□□ -0.34
SNF8-201ENST00000290330 FAM151AQ8WW52 585 aa12.93□□□□□ -0.34
SNF8-201ENST00000290330 OPTNQ96CV9 577 aa12.93□□□□□ -0.34
SNF8-201ENST00000290330 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
SNF8-201ENST00000290330 CSADQ9Y600 493 aa12.93□□□□□ -0.34
SNF8-201ENST00000290330 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
SNF8-201ENST00000290330 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
SNF8-201ENST00000290330 HOXD11P31277 338 aaPredicted RBP12.92□□□□□ -0.34
SNF8-201ENST00000290330 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
SNF8-201ENST00000290330 HOOK2Q96ED9 719 aa12.92□□□□□ -0.34
SNF8-201ENST00000290330 MS4A4AQ96JQ5 239 aa12.92□□□□□ -0.34
SNF8-201ENST00000290330 PTPN18Q99952 460 aa12.92□□□□□ -0.34
SNF8-201ENST00000290330 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
SNF8-201ENST00000290330 USP40Q9NVE5 1235 aa12.92□□□□□ -0.34
SNF8-201ENST00000290330 MYH13Q9UKX3 1938 aa12.92□□□□□ -0.34
SNF8-201ENST00000290330 GAKO14976 1311 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 SPDYE5A6NIY4 337 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 TCP10Q12799 353 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 GORABQ5T7V8 394 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 SPTY2D1Q68D10 685 aaPredicted RBP12.91□□□□□ -0.34
SNF8-201ENST00000290330 MIGA2Q7L4E1 593 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 DZIP1Q86YF9 867 aaKnown RBP12.91□□□□□ -0.34
SNF8-201ENST00000290330 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
SNF8-201ENST00000290330 WRNIP1Q96S55 665 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 SNCAIPQ9Y6H5 919 aa12.91□□□□□ -0.34
SNF8-201ENST00000290330 FKTNO75072 461 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 SURF6O75683 361 aaKnown RBP12.9□□□□□ -0.34
SNF8-201ENST00000290330 ARID4AP29374 1257 aaPredicted RBP12.9□□□□□ -0.34
SNF8-201ENST00000290330 OTUD7BQ6GQQ9 843 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 PI16Q6UXB8 463 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 ERO1BQ86YB8 467 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 SPATA5Q8NB90 893 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 ZKSCAN4Q969J2 545 aaPredicted RBP12.9□□□□□ -0.34
SNF8-201ENST00000290330 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 IDI2Q9BXS1 227 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 ZNF341Q9BYN7 854 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 GPR108Q9NPR9 543 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 OTOFQ9HC10 1997 aa12.9□□□□□ -0.34
SNF8-201ENST00000290330 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 RGS19P49795 217 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 GTF2A2P52657 109 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 MECOMQ03112 1051 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 CRHR2Q13324 411 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 PKN2Q16513 984 aaKnown RBP12.89□□□□□ -0.35
SNF8-201ENST00000290330 TNNI3KQ59H18 835 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 ERICH6Q7L0X2 663 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 ZFPM1Q8IX07 1006 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 PANK1Q8TE04 598 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 ZNF384Q8TF68 577 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 BRI3BPQ8WY22 251 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 NOP58Q9Y2X3 529 aaKnown RBP12.89□□□□□ -0.35
SNF8-201ENST00000290330 FPGT-TNNI3KV9GXZ4 949 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 LAMB1P07942 1786 aa12.89□□□□□ -0.35
SNF8-201ENST00000290330 GPR75-ASB3A0A0A6YYF3 556 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 ENTPD3O75355 529 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 INPP5BP32019 993 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 MCAMP43121 646 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 BTDP43251 543 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 RGS3P49796 1198 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 OS9Q13438 667 aaPredicted RBP12.88□□□□□ -0.35
SNF8-201ENST00000290330 CCL15Q16663 113 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 DBNDD2Q9BQY9 259 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 ZNF112Q9UJU3 913 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 MROH7-TTC4A0A0A0MT08 1334 aa12.88□□□□□ -0.35
SNF8-201ENST00000290330 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
SNF8-201ENST00000290330 IRF6O14896 467 aa12.87□□□□□ -0.35
SNF8-201ENST00000290330 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
SNF8-201ENST00000290330 RHBDL3P58872 404 aa12.87□□□□□ -0.35
SNF8-201ENST00000290330 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
SNF8-201ENST00000290330 NSUN4Q96CB9 384 aaKnown RBP12.87□□□□□ -0.35
SNF8-201ENST00000290330 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
SNF8-201ENST00000290330 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
SNF8-201ENST00000290330 LDHCP07864 332 aa12.86□□□□□ -0.35
SNF8-201ENST00000290330 CETPP11597 493 aa12.86□□□□□ -0.35
SNF8-201ENST00000290330 PPATQ06203 517 aa12.86□□□□□ -0.35
SNF8-201ENST00000290330 PPIL2Q13356 520 aa12.86□□□□□ -0.35
SNF8-201ENST00000290330 CCDC158Q5M9N0 1113 aa12.86□□□□□ -0.35
SNF8-201ENST00000290330 FBXO46Q6PJ61 603 aaPredicted RBP12.86□□□□□ -0.35
SNF8-201ENST00000290330 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms