RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 KCNH3Q9ULD8 1083 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 BMP15O95972 392 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 ZNF445P59923 1031 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 TRAF5O00463 557 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 HLA-DOAP06340 250 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 PNOCQ13519 176 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 SAP30BPQ9UHR5 308 aaKnown RBP13.55□□□□□ -0.24
SMG6-201ENST00000263073 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
SMG6-201ENST00000263073 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 SYNRGQ9UMZ2 1314 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 E7EVH7 732 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 BRAPQ7Z569 592 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 SMARCC2Q8TAQ2 1214 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 NSD2O96028 1365 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 TUBB4AP04350 444 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 PDE4DQ08499 809 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 ANO1Q5XXA6 986 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 SLF2Q8IX21 1173 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 TMTC2Q8N394 836 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 CARD14Q9BXL6 1004 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 NCKAP5LQ9HCH0 1330 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 GOLGA6BA6NDN3 693 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 KRT5P13647 590 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 KRT9P35527 623 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
SMG6-201ENST00000263073 STK38LQ9Y2H1 464 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 ZNF131P52739 623 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 ATP11AP98196 1134 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 RAD51AP2Q09MP3 1159 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.54□□□□□ -0.24
SMG6-201ENST00000263073 GAS2L3Q86XJ1 694 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 MTRF1LQ9UGC7 380 aaKnown RBP13.54□□□□□ -0.24
SMG6-201ENST00000263073 CYP26C1Q6V0L0 522 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 SND1Q7KZF4 910 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMG6-201ENST00000263073 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 STMN2Q93045 179 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 TCHPQ9BT92 498 aa13.54□□□□□ -0.24
SMG6-201ENST00000263073 PPANQ9NQ55 473 aaKnown RBP13.54□□□□□ -0.24
SMG6-201ENST00000263073 PTPRKQ15262 1439 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 IL15P40933 162 aaPredicted RBP13.53□□□□□ -0.24
SMG6-201ENST00000263073 GUCY2FP51841 1108 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 PPP1R21Q6ZMI0 780 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 ZNF202O95125 648 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 TPD52P55327 224 aaPredicted RBP13.53□□□□□ -0.24
SMG6-201ENST00000263073 EIF6P56537 245 aaKnown RBP13.53□□□□□ -0.24
SMG6-201ENST00000263073 CALCOCO2Q13137 446 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 IQUBQ8NA54 791 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 TSGA10Q9BZW7 698 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 C6orf50Q9HD87 102 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
SMG6-201ENST00000263073 XPO4Q9C0E2 1151 aaKnown RBP13.53□□□□□ -0.24
SMG6-201ENST00000263073 CHMP2AO43633 222 aa13.53□□□□□ -0.24
SMG6-201ENST00000263073 ATP2A1O14983 1001 aa13.52□□□□□ -0.24
SMG6-201ENST00000263073 MBD4O95243 580 aa13.52□□□□□ -0.24
SMG6-201ENST00000263073 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.24
SMG6-201ENST00000263073 MAEAQ7L5Y9 396 aa13.52□□□□□ -0.24
SMG6-201ENST00000263073 ARHGEF2Q92974 986 aaKnown RBP13.52□□□□□ -0.24
SMG6-201ENST00000263073 RRP36Q96EU6 259 aaKnown RBP13.52□□□□□ -0.24
SMG6-201ENST00000263073 STIM2Q9P246 746 aa13.52□□□□□ -0.24
SMG6-201ENST00000263073 COBLO75128 1261 aa13.52□□□□□ -0.24
SMG6-201ENST00000263073 ZNF594Q96JF6 807 aaPredicted RBP13.52□□□□□ -0.24
SMG6-201ENST00000263073 KCNJ14Q9UNX9 436 aa13.52□□□□□ -0.24
SMG6-201ENST00000263073 LDHCP07864 332 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 HARSP12081 509 aaKnown RBP13.52□□□□□ -0.25
SMG6-201ENST00000263073 PRPHP41219 470 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 GOLGA8FQ08AF8 430 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 GOLGA8DPQ0D2H9 430 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 NBPF6Q5VWK0 638 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.25
SMG6-201ENST00000263073 CCDC65Q8IXS2 484 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 ARFGAP2Q8N6H7 521 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 NBPF4Q96M43 638 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 ZSCAN26Q16670 478 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 MAP7D1Q3KQU3 841 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 SEL1L2Q5TEA6 688 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 GPT2Q8TD30 523 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 FAM114A2Q9NRY5 505 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 RAD50Q92878 1312 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 EXOC5O00471 708 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 PRDM1O75626 825 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 ATP1A2P50993 1020 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 PSMD6Q15008 389 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 CFAP157Q5JU67 520 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 SREK1Q8WXA9 508 aaKnown RBP13.52□□□□□ -0.25
SMG6-201ENST00000263073 TRIM7Q9C029 511 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 DNAI2Q9GZS0 605 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 NKIRAS1Q9NYS0 192 aa13.52□□□□□ -0.25
SMG6-201ENST00000263073 PNMA6EA0A0J9YXQ4 647 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
SMG6-201ENST00000263073 CTDSPL2Q05D32 466 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
SMG6-201ENST00000263073 SECISBP2LQ93073 1101 aaKnown RBP13.51□□□□□ -0.25
SMG6-201ENST00000263073 SPOPO43791 374 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms