RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 LRRC24Q50LG9 513 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 MAP1SQ66K74 1059 aaPredicted RBP11.2□□□□□ -0.62
TGFB3-201ENST00000238682 SMAP1Q8IYB5 467 aaPredicted RBP11.2□□□□□ -0.62
TGFB3-201ENST00000238682 EAF2Q96CJ1 260 aaPredicted RBP11.2□□□□□ -0.62
TGFB3-201ENST00000238682 EVI5LQ96CN4 794 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 MINPP1Q9UNW1 487 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 A0A1B0GUL7 405 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 ARID4AP29374 1257 aaPredicted RBP11.2□□□□□ -0.62
TGFB3-201ENST00000238682 CHRNDQ07001 517 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 TTF1Q15361 905 aaPredicted RBP11.2□□□□□ -0.62
TGFB3-201ENST00000238682 TNS4Q8IZW8 715 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 C2orf69Q8N8R5 385 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 PI4K2BQ8TCG2 481 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 GMLQ99445 158 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 SIL1Q9H173 461 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 ZNF804BA4D1E1 1349 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 TPM2P07951 284 aa11.19□□□□□ -0.62
TGFB3-201ENST00000238682 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
TGFB3-201ENST00000238682 CAPNS2Q96L46 248 aa11.19□□□□□ -0.62
TGFB3-201ENST00000238682 HAUS7Q99871 368 aa11.19□□□□□ -0.62
TGFB3-201ENST00000238682 RAD50Q92878 1312 aa11.19□□□□□ -0.62
TGFB3-201ENST00000238682 CDC45O75419 566 aa11.19□□□□□ -0.62
TGFB3-201ENST00000238682 RAD17O75943 681 aa11.19□□□□□ -0.62
TGFB3-201ENST00000238682 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
TGFB3-201ENST00000238682 ZNF594Q96JF6 807 aaPredicted RBP11.19□□□□□ -0.62
TGFB3-201ENST00000238682 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
TGFB3-201ENST00000238682 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
TGFB3-201ENST00000238682 USP17L8P0C7I0 530 aa11.18□□□□□ -0.62
TGFB3-201ENST00000238682 CAVIN4Q5BKX8 364 aa11.18□□□□□ -0.62
TGFB3-201ENST00000238682 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
TGFB3-201ENST00000238682 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
TGFB3-201ENST00000238682 ZNF804AQ7Z570 1209 aa11.18□□□□□ -0.62
TGFB3-201ENST00000238682 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
TGFB3-201ENST00000238682 RIOK3O14730 519 aaKnown RBP11.18□□□□□ -0.62
TGFB3-201ENST00000238682 ZFYP08048 801 aaPredicted RBP11.18□□□□□ -0.62
TGFB3-201ENST00000238682 NOM1Q5C9Z4 860 aaKnown RBP11.18□□□□□ -0.62
TGFB3-201ENST00000238682 ZSCAN25Q6NSZ9 544 aa11.18□□□□□ -0.62
TGFB3-201ENST00000238682 PUS3Q9BZE2 481 aaKnown RBP11.18□□□□□ -0.62
TGFB3-201ENST00000238682 IL1RAPL2Q9NP60 686 aa11.18□□□□□ -0.62
TGFB3-201ENST00000238682 DBNLQ9UJU6 430 aaKnown RBP11.18□□□□□ -0.62
TGFB3-201ENST00000238682 AK9Q5TCS8 1911 aa11.18□□□□□ -0.62
TGFB3-201ENST00000238682 ZNF646O15015 1829 aaPredicted RBP11.18□□□□□ -0.62
TGFB3-201ENST00000238682 MAST2Q6P0Q8 1798 aa11.18□□□□□ -0.62
TGFB3-201ENST00000238682 CELF2O95319 508 aaKnown RBP11.17□□□□□ -0.62
TGFB3-201ENST00000238682 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 OGFOD1Q8N543 542 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 KLHDC4Q8TBB5 520 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 RUFY2Q8WXA3 655 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 GBA2Q9HCG7 927 aaPredicted RBP11.17□□□□□ -0.62
TGFB3-201ENST00000238682 HSPA8P11142 646 aaKnown RBP11.17□□□□□ -0.62
TGFB3-201ENST00000238682 NF2P35240 595 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 DBNDD1Q9H9R9 158 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 DOCK2Q92608 1830 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 SALL1Q9NSC2 1324 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 IRS2Q9Y4H2 1338 aa11.17□□□□□ -0.62
TGFB3-201ENST00000238682 MARCH6O60337 910 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 SEC24BO95487 1268 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 KCNJ4P48050 445 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 TTC39AQ5SRH9 613 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 TAF3Q5VWG9 929 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 KRT26Q7Z3Y9 468 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 ZGPATQ8N5A5 531 aaKnown RBP11.16□□□□□ -0.62
TGFB3-201ENST00000238682 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 DENND2AQ9ULE3 1009 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 IVNS1ABPQ9Y6Y0 642 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 IL1R1P14778 569 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 DACT2Q5SW24 774 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 CST9Q5W186 159 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 MYOZ2Q9NPC6 264 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 SUGT1Q9Y2Z0 365 aa11.16□□□□□ -0.62
TGFB3-201ENST00000238682 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
TGFB3-201ENST00000238682 RGMBQ6NW40 437 aa11.15□□□□□ -0.62
TGFB3-201ENST00000238682 FAM205AQ6ZU69 1335 aa11.15□□□□□ -0.62
TGFB3-201ENST00000238682 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
TGFB3-201ENST00000238682 FOXN1O15353 648 aa11.15□□□□□ -0.62
TGFB3-201ENST00000238682 GSPT1P15170 499 aaKnown RBP11.15□□□□□ -0.62
TGFB3-201ENST00000238682 HTRA3P83110 453 aa11.15□□□□□ -0.62
TGFB3-201ENST00000238682 GPR101Q96P66 508 aaPredicted RBP11.15□□□□□ -0.62
TGFB3-201ENST00000238682 DBNDD2Q9BQY9 259 aa11.15□□□□□ -0.62
TGFB3-201ENST00000238682 SLC10A3P09131 477 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 HDLBPQ00341 1268 aaKnown RBP11.14□□□□□ -0.63
TGFB3-201ENST00000238682 ZBED3Q96IU2 234 aaPredicted RBP11.14□□□□□ -0.63
TGFB3-201ENST00000238682 NEUROD6Q96NK8 337 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 GLIS2Q9BZE0 524 aaPredicted RBP11.14□□□□□ -0.63
TGFB3-201ENST00000238682 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.14□□□□□ -0.63
TGFB3-201ENST00000238682 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
TGFB3-201ENST00000238682 COL4A1P02462 1669 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 LAMB1P07942 1786 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 PTMAP06454 111 aaKnown RBP11.14□□□□□ -0.63
TGFB3-201ENST00000238682 SDSP20132 328 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 PTMSP20962 102 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 MRIQ9BWK5 157 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
TGFB3-201ENST00000238682 CCDC8Q9H0W5 538 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms