RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 PTPN12Q05209 780 aaKnown RBP6.3□□□□□ -1.4
RUFY3-201ENST00000226328 NFXL1Q6ZNB6 911 aa6.3□□□□□ -1.4
RUFY3-201ENST00000226328 SSH3Q8TE77 659 aa6.3□□□□□ -1.4
RUFY3-201ENST00000226328 EVI5LQ96CN4 794 aa6.3□□□□□ -1.4
RUFY3-201ENST00000226328 DBNDD2Q9BQY9 259 aa6.3□□□□□ -1.4
RUFY3-201ENST00000226328 TDRD3Q9H7E2 651 aaKnown RBP6.3□□□□□ -1.4
RUFY3-201ENST00000226328 BCORQ6W2J9 1755 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 RASA3Q14644 834 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 GADL1Q6ZQY3 521 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 FASTKD5Q7L8L6 764 aaKnown RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 IQCA1Q86XH1 822 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 UBAC1Q9BSL1 405 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 GLIS2Q9BZE0 524 aaPredicted RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 SLC4A4Q9Y6R1 1079 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 SCN7AQ01118 1682 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 TTC41PQ6P2S7 1318 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 MANSC4A6NHS7 340 aaPredicted RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 REC8O95072 547 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 PHKA1P46020 1223 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 HHIPL2Q6UWX4 724 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 FOXP4Q8IVH2 680 aaPredicted RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 FAM84BQ96KN1 310 aaPredicted RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 DEFB129Q9H1M3 183 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 ZFYVE28Q9HCC9 887 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 ECM2O94769 699 aaPredicted RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 USP14P54578 494 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 MAP3K9P80192 1104 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 IMMTQ16891 758 aaKnown RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 RGMBQ6NW40 437 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 TDRD7Q8NHU6 1098 aaKnown RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 L3MBTL3Q96JM7 780 aaPredicted RBP6.29□□□□□ -1.4
RUFY3-201ENST00000226328 WRNIP1Q96S55 665 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 TMEM106CQ9BVX2 250 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 MTMR7Q9Y216 660 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 RIPOR2Q9Y4F9 1068 aa6.29□□□□□ -1.4
RUFY3-201ENST00000226328 ZBTB7BO15156 539 aaPredicted RBP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 CTCFP49711 727 aaPredicted RBP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 AATFQ9NY61 560 aaKnown RBP eCLIP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 PI4KBQ9UBF8 816 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 ZNF541Q9H0D2 1346 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 KIF13BQ9NQT8 1826 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 TSPY2A6NKD2 308 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 MTX1Q13505 466 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 CCDC96Q2M329 555 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 C3orf67Q6ZVT6 689 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 TRMT2AQ8IZ69 625 aaKnown RBP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 MIGA1Q8NAN2 632 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 EXOC6Q8TAG9 804 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 CREBZFQ9NS37 354 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 KIAA1551Q9HCM1 1747 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 MKRN3Q13064 507 aaKnown RBP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 SNAPC2Q13487 334 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 TAF1CQ15572 869 aaPredicted RBP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 EPHA10Q5JZY3 1008 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 VPS53Q5VIR6 699 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 C15orf52Q6ZUT6 534 aaKnown RBP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 CAPNS2Q96L46 248 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 CCDC17Q96LX7 622 aa6.28□□□□□ -1.4
RUFY3-201ENST00000226328 ZNF70Q9UC06 446 aaPredicted RBP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 MYH14Q7Z406 1995 aaKnown RBP6.28□□□□□ -1.4
RUFY3-201ENST00000226328 NRXN2Q9P2S2 1712 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 ENTPD3O75355 529 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 ASNSP08243 561 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 CETPP11597 493 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 RAB3GAP1Q15042 981 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 PITPNM2Q9BZ72 1349 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 TSPY3P0CV98 308 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 TSPY8P0CW00 308 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 GTF2A2P52657 109 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 FBXO33Q7Z6M2 555 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 MAPKAPK5Q8IW41 473 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 FAM151AQ8WW52 585 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 CDCA5Q96FF9 252 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 PNMA2Q9UL42 364 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 U3KPZ7 1027 aaPredicted RBP6.27□□□□□ -1.41
RUFY3-201ENST00000226328 RANBP6O60518 1105 aaKnown RBP6.27□□□□□ -1.41
RUFY3-201ENST00000226328 FMNL1O95466 1100 aaPredicted RBP6.27□□□□□ -1.41
RUFY3-201ENST00000226328 KCNA3P22001 575 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 ZAP70P43403 619 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 CHD1LQ86WJ1 897 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 TBC1D2Q9BYX2 928 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 KIF3AQ9Y496 699 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 UTYO14607 1347 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 FAM205AQ6ZU69 1335 aa6.27□□□□□ -1.41
RUFY3-201ENST00000226328 PNMA6EA0A0J9YXQ4 647 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 RNF113AO15541 343 aaKnown RBP6.26□□□□□ -1.41
RUFY3-201ENST00000226328 MARCH6O60337 910 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 IL1R1P14778 569 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 COA7Q96BR5 231 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 ANO2Q9NQ90 1003 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 ZBTB40Q9NUA8 1239 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 SWAP70Q9UH65 585 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 HERC5Q9UII4 1024 aaKnown RBP6.26□□□□□ -1.41
RUFY3-201ENST00000226328 SPDYE2BA6NHP3 402 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 UBE2Q2LH0YL09 131 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 SPDYE6P0CI01 402 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 GNL2Q13823 731 aaKnown RBP6.26□□□□□ -1.41
RUFY3-201ENST00000226328 DACT2Q5SW24 774 aa6.26□□□□□ -1.41
RUFY3-201ENST00000226328 NBPF11Q86T75 865 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms