RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 RFNGQ9Y644 331 aa11.93□□□□□ -0.5
PHGDH-213ENST00000641272 PKHD1P08F94 4074 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 IGKV1OR2-108A0A075B7D4 117 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 A0A1B0GVY2 172 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 GPX4P36969 197 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-213ENST00000641272 ZNF79Q15937 498 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 FAM78BQ5VT40 261 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 LINC00336Q6ZUF6 198 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 OR8I2Q8N0Y5 310 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 C20orf173Q96LM9 149 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 C7orf50Q9BRJ6 194 aaKnown RBP11.92□□□□□ -0.5
PHGDH-213ENST00000641272 SLIRPQ9GZT3 109 aaKnown RBP11.92□□□□□ -0.5
PHGDH-213ENST00000641272 MAGT1Q9H0U3 335 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 SLC25A32Q9H2D1 315 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 RABL2AQ9UBK7 228 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-213ENST00000641272 RABL2BQ9UNT1 228 aa11.92□□□□□ -0.5
PHGDH-213ENST00000641272 DNAH11Q96DT5 4516 aa11.91□□□□□ -0.5
PHGDH-213ENST00000641272 FABP12A6NFH5 140 aa11.91□□□□□ -0.5
PHGDH-213ENST00000641272 PRSS29PA6NIE9 313 aa11.91□□□□□ -0.5
PHGDH-213ENST00000641272 RTL8CO15255 209 aa11.91□□□□□ -0.5
PHGDH-213ENST00000641272 NOL3O60936 208 aaKnown RBP11.91□□□□□ -0.5
PHGDH-213ENST00000641272 FABP1P07148 127 aa11.91□□□□□ -0.5
PHGDH-213ENST00000641272 TNFSF8P32971 234 aa11.91□□□□□ -0.5
PHGDH-213ENST00000641272 RAB11AP62491 216 aa11.91□□□□□ -0.5
PHGDH-213ENST00000641272 DKK2Q9UBU2 259 aa11.91□□□□□ -0.5
PHGDH-213ENST00000641272 A0A0J9YX75 114 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 LOC102723971A0A1B0GUV8 181 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 TMEM189A5PLL7 270 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 H3BMQ9 156 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 H3BP45 60 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 PITX3O75364 302 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-213ENST00000641272 C1orf194Q5T5A4 169 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 EBLN2Q6P2I7 272 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 C1orf158Q8N1D5 194 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 MCFD2Q8NI22 146 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 TRIM63Q969Q1 353 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 C16orf92Q96LL3 132 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 TRGV9Q99603 122 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 GOLT1BQ9Y3E0 138 aa11.9□□□□□ -0.5
PHGDH-213ENST00000641272 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.5
PHGDH-213ENST00000641272 SNRPGP15A8MWD9 76 aa11.89□□□□□ -0.51
PHGDH-213ENST00000641272 WRBO00258 174 aa11.89□□□□□ -0.51
PHGDH-213ENST00000641272 ISLRO14498 428 aa11.89□□□□□ -0.51
PHGDH-213ENST00000641272 HBE1P02100 147 aa11.89□□□□□ -0.51
PHGDH-213ENST00000641272 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
PHGDH-213ENST00000641272 TMBIM6P55061 237 aa11.89□□□□□ -0.51
PHGDH-213ENST00000641272 PSG9Q00887 426 aa11.89□□□□□ -0.51
PHGDH-213ENST00000641272 THAP8Q8NA92 274 aa11.89□□□□□ -0.51
PHGDH-213ENST00000641272 NIPSNAP3BQ9BS92 247 aa11.89□□□□□ -0.51
PHGDH-213ENST00000641272 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 SMIM9A6NGZ8 99 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 PAX9P55771 341 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 AKR1C1Q04828 323 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 PYDC2Q56P42 97 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 IGFL4Q6B9Z1 124 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 TMEM182Q6ZP80 229 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-213ENST00000641272 TOMM5Q8N4H5 51 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 SOSTQ9BQB4 213 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 RPRMQ9NS64 109 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 DOK5Q9P104 306 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 NACAE9PAV3 2078 aa11.88□□□□□ -0.51
PHGDH-213ENST00000641272 PRSS46E5RG02 174 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 HOXB5P09067 269 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 PRB4P10163 310 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-213ENST00000641272 ORM2P19652 201 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 GALR1P47211 349 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 ATP5IP56385 69 aaPredicted RBP11.87□□□□□ -0.51
PHGDH-213ENST00000641272 PPP1R1AQ13522 171 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 RRN3P1Q2M238 152 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 TMEM88Q6PEY1 159 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 ACOT7LQ6ZUV0 252 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 OR1B1Q8NGR6 318 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 C17orf77Q96MU5 243 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 BCL7BQ9BQE9 202 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 TMEM208Q9BTX3 173 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 RSG1Q9BU20 258 aa11.87□□□□□ -0.51
PHGDH-213ENST00000641272 TEX48A0A1B0GUV7 120 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 SMCO3A2RU48 225 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 ZNF98A6NK75 572 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 M0R2Z0 102 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 SYNGR2O43760 224 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 MED6O75586 246 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 IFNA21P01568 189 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 PRM2P04554 102 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 MEOX2P50222 304 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 DAD1P61803 113 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 FGL1Q08830 312 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 SPINK13Q1W4C9 94 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 SPATA31B1PQ5VZV4 182 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 RNF182Q8N6D2 247 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 BPIFCQ8NFQ6 507 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 V9GYH0 126 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 PKD1P98161 4303 aa11.86□□□□□ -0.51
PHGDH-213ENST00000641272 SFT2D2O95562 160 aa11.85□□□□□ -0.51
PHGDH-213ENST00000641272 AP3S2P59780 193 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms