RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 DLX6P56179 175 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 C17orf58Q2M2W7 97 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 PLA2G2CQ5R387 149 aa4.54□□□□□ -1.68
SCN3A-210ENST00000640652 ZCCHC24Q8N2G6 241 aaKnown RBP4.54□□□□□ -1.68
SCN3A-210ENST00000640652 TFF1P04155 84 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 IL4P05112 153 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 HOXA4Q00056 320 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-210ENST00000640652 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF114Q8NC26 417 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 SPAARA0A1B0GVQ0 90 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 CA1P00915 261 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-210ENST00000640652 CKS2P33552 79 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 LYPD1Q8N2G4 141 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 TMEM167AQ8TBQ9 72 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 PRDM6Q9NQX0 595 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 IGLV3-9A0A075B6K5 115 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 GATA2P23769 480 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-210ENST00000640652 WDFY4Q6ZS81 3184 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 K7EN84 100 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 ARL3P36405 182 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 TMEM75Q8N9X5 138 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 EREGO14944 169 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 PYYP10082 97 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 APOBEC3AP31941 199 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-210ENST00000640652 NUDT10Q8NFP7 164 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 NUDT11Q96G61 164 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF414Q96IQ9 312 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 RNF5Q99942 180 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 SSBP4Q9BWG4 385 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-210ENST00000640652 SMIM17P0DL12 118 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 C18orf32Q8TCD1 76 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 POLQO75417 2590 aa4.53□□□□□ -1.68
SCN3A-210ENST00000640652 TNRC18O15417 2968 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-210ENST00000640652 TMEM178BH3BS89 294 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 NIT1Q86X76 327 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 METTL26Q96S19 204 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 DOPEY1Q5JWR5 2465 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 PPIAL4CA0A0B4J2A2 164 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 INS-IGF2F8WCM5 200 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 FAM87AP0C7U9 286 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 PPIAL4GP0DN37 164 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 IGHV1-8P0DP01 117 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 FABP2P12104 132 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 MFAP4P55083 255 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM200BQ69YZ2 307 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 TMUB1Q9BVT8 246 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 LRBAP50851 2863 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 ZNF785A8K8V0 405 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 DLEU1O43261 78 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 SRSF12Q8WXF0 261 aaKnown RBP4.52□□□□□ -1.69
SCN3A-210ENST00000640652 NBR2O15453 112 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 GNG5P63218 68 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 PRR20EP86478 221 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 PRR20CP86479 221 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 PRR20DP86480 221 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 PRR20BP86481 221 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 PRR20AP86496 221 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 LINC00311Q8N616 119 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 RNF125Q96EQ8 232 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 MS4A6AQ9H2W1 248 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 MAP1LC3AQ9H492 121 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 LINC00574Q9H8X3 128 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 SPEGQ15772 3267 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 ORM1P02763 201 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 FAM201AQ5SY85 155 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 IGF2-ASQ6U949 168 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM136Q6ZRR5 245 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 THAP8Q8NA92 274 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 SPRY4Q9C004 299 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 KALRNO60229 2985 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 A0A1B0GUS0 222 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 FAM106CPP0CH98 169 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 LINC00205P59089 165 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 SLAQ13239 276 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 ZNF788Q6ZQV5 615 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM208Q9BTX3 173 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM14CQ9P0S9 112 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 ZNF492Q9P255 531 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 PPBPP02775 128 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 ZNF474Q6S9Z5 364 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-210ENST00000640652 TMEM116Q8NCL8 245 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 DDB2Q92466 427 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 C5orf30Q96GV9 206 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 ALKBH7Q9BT30 221 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-210ENST00000640652 RABAC1Q9UI14 185 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 AKAP13Q12802 2813 aa4.52□□□□□ -1.69
SCN3A-210ENST00000640652 IGHV3-21A0A0B4J1V1 117 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 IGHV3-48P01763 117 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 HIST1H1AQ02539 215 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-210ENST00000640652 LYRM7Q5U5X0 104 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 SLC25A39Q9BZJ4 359 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-210ENST00000640652 UFC1Q9Y3C8 167 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 IGHV2-26A0A0B4J1V2 119 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 SYS1-DBNDD2H3BUS1 97 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 TCRAP04437 139 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 SEC11AP67812 179 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 PRSS8Q16651 343 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 TRBV20OR9-2A0A075B6H5 130 aa4.51□□□□□ -1.69
SCN3A-210ENST00000640652 KLF5Q13887 457 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-210ENST00000640652 A0A1W2PPI3 338 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms