RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 TMEM37Q8WXS4 190 aa6.73□□□□□ -1.33
HLA-B-258ENST00000640615 RCC1LQ96I51 464 aaKnown RBP6.73□□□□□ -1.33
HLA-B-258ENST00000640615 ZNF414Q96IQ9 312 aa6.73□□□□□ -1.33
HLA-B-258ENST00000640615 PFDN5Q99471 154 aa6.73□□□□□ -1.33
HLA-B-258ENST00000640615 ACTR3CQ9C0K3 210 aaPredicted RBP6.73□□□□□ -1.33
HLA-B-258ENST00000640615 RABAC1Q9UI14 185 aa6.73□□□□□ -1.33
HLA-B-258ENST00000640615 HIGD1AQ9Y241 93 aa6.73□□□□□ -1.33
HLA-B-258ENST00000640615 CCL24O00175 119 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 ZNF207O43670 478 aaKnown RBP6.72□□□□□ -1.33
HLA-B-258ENST00000640615 EIF3GO75821 320 aaKnown RBP eCLIP6.72□□□□□ -1.33
HLA-B-258ENST00000640615 HOXD3P31249 432 aaPredicted RBP6.72□□□□□ -1.33
HLA-B-258ENST00000640615 SLURP1P55000 103 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 SYNJ2BPP57105 145 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 RAB14P61106 215 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 RHOBP62745 196 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 SPATA31B1PQ5VZV4 182 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 UNQ9165/PRO28630Q6UXU0 137 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 DPPA3Q6W0C5 159 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 MIR17HGQ75NE6 70 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 LINC00305Q7Z4B0 112 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 S100A7AQ86SG5 101 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 RPP25LQ8N5L8 163 aaKnown RBP6.72□□□□□ -1.33
HLA-B-258ENST00000640615 GATAD1Q8WUU5 269 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 PCNPQ8WW12 178 aaKnown RBP6.72□□□□□ -1.33
HLA-B-258ENST00000640615 RAX2Q96IS3 184 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 UHRF2Q96PU4 802 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 METTL26Q96S19 204 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 RNF2Q99496 336 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 ZFAND3Q9H8U3 227 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 SLC25A22Q9H936 323 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 SEPSECSQ9HD40 501 aaKnown RBP6.72□□□□□ -1.33
HLA-B-258ENST00000640615 MRPL27Q9P0M9 148 aaKnown RBP6.72□□□□□ -1.33
HLA-B-258ENST00000640615 FUT9Q9Y231 359 aa6.72□□□□□ -1.33
HLA-B-258ENST00000640615 TRAV5A0A0B4J249 113 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 ADARB2-AS1A8MUL3 147 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 HMGB3O15347 200 aaKnown RBP6.71□□□□□ -1.34
HLA-B-258ENST00000640615 NPPCP23582 126 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 S100A7P31151 101 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 CDC34P49427 236 aaPredicted RBP6.71□□□□□ -1.34
HLA-B-258ENST00000640615 KLF5Q13887 457 aaPredicted RBP6.71□□□□□ -1.34
HLA-B-258ENST00000640615 ZNF726P1Q15940 193 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 TM4SF20Q53R12 229 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 LCN15Q6UWW0 184 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 C12orf54Q6X4T0 127 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 C1QL4Q86Z23 238 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 C3orf56Q8N813 242 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 LRRC20Q8TCA0 184 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 SFT2D1Q8WV19 159 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 TMEM190Q8WZ59 177 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 RAB24Q969Q5 203 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 CITED1Q99966 193 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 MRPL32Q9BYC8 188 aaKnown RBP6.71□□□□□ -1.34
HLA-B-258ENST00000640615 SLC25A39Q9BZJ4 359 aaPredicted RBP6.71□□□□□ -1.34
HLA-B-258ENST00000640615 PFDN2Q9UHV9 154 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 UFC1Q9Y3C8 167 aa6.71□□□□□ -1.34
HLA-B-258ENST00000640615 TENM1Q9UKZ4 2725 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 IGHV3-49A0A0A0MS15 119 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 IGHV3-66A0A0C4DH42 116 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 CTXND1A0A1B0GTU2 59 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 A0A1B0GV50 99 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 SEC14L6B5MCN3 397 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 K7EMT4 169 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 RGS13O14921 159 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 C8orf88P0DMB2 117 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 MYCNOSP40205 109 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 BLOC1S1P78537 153 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 MORN5Q5VZ52 161 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 LEMD1Q68G75 181 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 SSX7Q7RTT5 188 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 REC114Q7Z4M0 266 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 DLX4Q92988 240 aaPredicted RBP6.7□□□□□ -1.34
HLA-B-258ENST00000640615 SAT2Q96F10 170 aaPredicted RBP6.7□□□□□ -1.34
HLA-B-258ENST00000640615 NARS2Q96I59 477 aaKnown RBP6.7□□□□□ -1.34
HLA-B-258ENST00000640615 SHANK2-AS3Q9BTD1 123 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 SCRT1Q9BWW7 348 aa6.7□□□□□ -1.34
HLA-B-258ENST00000640615 TECRQ9NZ01 308 aaKnown RBP6.7□□□□□ -1.34
HLA-B-258ENST00000640615 IGHV3OR16-13A0A075B7E8 117 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 IGHV3-74A0A0B4J1X5 117 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 MAP1LC3B2A6NCE7 125 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 ZNF98A6NK75 572 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 H3BRN7 92 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 LGALS9O00182 355 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 APOHP02749 345 aaPredicted RBP6.69□□□□□ -1.34
HLA-B-258ENST00000640615 NMBP08949 121 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 CRYBB3P26998 211 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 FGF8P55075 233 aaPredicted RBP6.69□□□□□ -1.34
HLA-B-258ENST00000640615 TAS2R45P59539 299 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 FHL3Q13643 280 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 KHDC3LQ587J8 217 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 IQCF2Q8IXL9 164 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 MBD3L1Q8WWY6 194 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 SLC25A2Q9BXI2 301 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 MAP1LC3BQ9GZQ8 125 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 HRH4Q9H3N8 390 aa6.69□□□□□ -1.34
HLA-B-258ENST00000640615 DAZ1Q9NQZ3 744 aaKnown RBP6.69□□□□□ -1.34
HLA-B-258ENST00000640615 IGHV7-4-1A0A0J9YVY3 117 aa6.68□□□□□ -1.34
HLA-B-258ENST00000640615 A0A1W2PS18 150 aa6.68□□□□□ -1.34
HLA-B-258ENST00000640615 TEX46H3BTG2 121 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms