RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 OPCMLQ14982 345 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 FAM90A2PQ658T7 463 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 LAMTOR1Q6IAA8 161 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 C16orf54Q6UWD8 224 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 OR11H4Q8NGC9 324 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 NPCDR1Q9BY65 106 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 WDR61Q9GZS3 305 aaKnown RBP9.91□□□□□ -0.82
GTF3A-209ENST00000640289 ARL6Q9H0F7 186 aa9.91□□□□□ -0.82
GTF3A-209ENST00000640289 TSPAN4O14817 238 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 ARPC5O15511 151 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 OR5G3P0C626 314 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 TFPI2P48307 235 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 B2MP61769 119 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 PRR20EP86478 221 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 PRR20CP86479 221 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 PRR20DP86480 221 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 PRR20BP86481 221 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 PRR20AP86496 221 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 GBGT1Q8N5D6 347 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 INO80EQ8NBZ0 244 aaPredicted RBP9.9□□□□□ -0.82
GTF3A-209ENST00000640289 GLMPQ8WWB7 406 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 PPP1R14BQ96C90 147 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 GRAMD2BQ96HH9 432 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 UHRF2Q96PU4 802 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 TMEM231Q9H6L2 316 aa9.9□□□□□ -0.82
GTF3A-209ENST00000640289 MPDU1O75352 247 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 HYPMO75409 117 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 CD7P09564 240 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 RPL29P47914 159 aaKnown RBP9.89□□□□□ -0.83
GTF3A-209ENST00000640289 RPL11P62913 178 aaKnown RBP9.89□□□□□ -0.83
GTF3A-209ENST00000640289 LEMD1Q68G75 181 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 WFDC3Q8IUB2 231 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 SPAG8Q99932 426 aaPredicted RBP9.89□□□□□ -0.83
GTF3A-209ENST00000640289 RSG1Q9BU20 258 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 SLC25A39Q9BZJ4 359 aaPredicted RBP9.89□□□□□ -0.83
GTF3A-209ENST00000640289 ARV1Q9H2C2 271 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 SLC39A9Q9NUM3 307 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 HIGD1AQ9Y241 93 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 RFNGQ9Y644 331 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 PXMP4Q9Y6I8 212 aa9.89□□□□□ -0.83
GTF3A-209ENST00000640289 ZNF98A6NK75 572 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 H3BRN7 92 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 IFNA5P01569 189 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 CD81P60033 236 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 SIGLEC15Q6ZMC9 328 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 Q6ZRG5 221 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 Q8N1Y9 231 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 MRAPQ8TCY5 172 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 TMEM37Q8WXS4 190 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 NEURL2Q9BR09 285 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 SCRT1Q9BWW7 348 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 MS4A6AQ9H2W1 248 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 SLC25A22Q9H936 323 aa9.88□□□□□ -0.83
GTF3A-209ENST00000640289 COX7A2P2O60397 106 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 CD5P06127 495 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 CD300CQ08708 224 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 GCSAMLQ5JQS6 135 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 PXDC1Q5TGL8 231 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 GTSCR1Q86UQ5 136 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 TCTE3Q8IZS6 198 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 STXBP6Q8NFX7 210 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 SCGB1C1Q8TD33 95 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 SHANK2-AS3Q9BTD1 123 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 PARD6GQ9BYG4 376 aaPredicted RBP9.87□□□□□ -0.83
GTF3A-209ENST00000640289 MFFQ9GZY8 342 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 WFDC10AQ9H1F0 79 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 SLC25A32Q9H2D1 315 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 UBQLN2Q9UHD9 624 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 PFDN2Q9UHV9 154 aa9.87□□□□□ -0.83
GTF3A-209ENST00000640289 HELTA6NFD8 242 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 OR4C46A6NHA9 309 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 C17orf112F2Z3M2 114 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 DNASE2O00115 360 aaPredicted RBP9.86□□□□□ -0.83
GTF3A-209ENST00000640289 DEFB121Q5J5C9 76 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 C1orf194Q5T5A4 169 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 MORN5Q5VZ52 161 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 C10orf113Q5VZT2 155 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 RPL7L1Q6DKI1 246 aaKnown RBP9.86□□□□□ -0.83
GTF3A-209ENST00000640289 LINC00305Q7Z4B0 112 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 AKAP14Q86UN6 197 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 OR8I2Q8N0Y5 310 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 FAM24BQ8N5W8 94 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 ZNF709Q8N972 641 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 HSD17B11Q8NBQ5 300 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 DNAJC4Q9NNZ3 241 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 NBEAL1Q6ZS30 2694 aa9.86□□□□□ -0.83
GTF3A-209ENST00000640289 ELOA3CA0A087WX78 387 aaPredicted RBP9.85□□□□□ -0.83
GTF3A-209ENST00000640289 HMSDA8MTL9 139 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 CXCL2P19875 107 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 PAFAH1B2P68402 229 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 ZNF266Q14584 549 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 ODF3L2Q3SX64 289 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 DEFB125Q8N687 156 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 OR1L4Q8NGR5 311 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 C19orf73Q9NVV2 129 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 SMAD5-AS1Q9Y6J3 95 aa9.85□□□□□ -0.83
GTF3A-209ENST00000640289 FBN3Q75N90 2809 aa9.84□□□□□ -0.83
GTF3A-209ENST00000640289 TRAV5A0A0B4J249 113 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms