RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 BPIFCQ8NFQ6 507 aa9.25□□□□□ -0.93
CLN6-225ENST00000638144 DCANP1Q8TF63 244 aa9.25□□□□□ -0.93
CLN6-225ENST00000638144 SLC25A22Q9H936 323 aa9.25□□□□□ -0.93
CLN6-225ENST00000638144 ALG5Q9Y673 324 aa9.25□□□□□ -0.93
CLN6-225ENST00000638144 HELTA6NFD8 242 aa9.24□□□□□ -0.93
CLN6-225ENST00000638144 KNCNA6PVL3 124 aa9.24□□□□□ -0.93
CLN6-225ENST00000638144 LINC00869P0C866 280 aa9.24□□□□□ -0.93
CLN6-225ENST00000638144 PVALBP20472 110 aaPredicted RBP9.24□□□□□ -0.93
CLN6-225ENST00000638144 PSMG4Q5JS54 123 aa9.24□□□□□ -0.93
CLN6-225ENST00000638144 SCRT1Q9BWW7 348 aa9.24□□□□□ -0.93
CLN6-225ENST00000638144 LYRM2Q9NU23 88 aaPredicted RBP9.24□□□□□ -0.93
CLN6-225ENST00000638144 OR5AC2Q9NZP5 309 aa9.24□□□□□ -0.93
CLN6-225ENST00000638144 TRAV2A0A0B4J234 112 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 UBE2L5PA0A1B0GUS4 154 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 H0YIZ8 118 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 DEDDO75618 318 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 DEFB1P60022 68 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 TEPPQ6URK8 271 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 TMEM252Q8N6L7 170 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 UHRF2Q96PU4 802 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 MGST2Q99735 147 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 SLC25A32Q9H2D1 315 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 NPVFQ9HCQ7 196 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 NRN1Q9NPD7 142 aa9.23□□□□□ -0.93
CLN6-225ENST00000638144 AGPAT2O15120 278 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 PTTG1O95997 202 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 OR5G3P0C626 314 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 NUP62P37198 522 aaPredicted RBP9.22□□□□□ -0.93
CLN6-225ENST00000638144 SULT1A1P50225 295 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 OR8I2Q8N0Y5 310 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 OVOL2Q9BRP0 275 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 TMEM147Q9BVK8 224 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 NMES1Q9C002 83 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 ARL6Q9H0F7 186 aa9.22□□□□□ -0.93
CLN6-225ENST00000638144 TENM2Q9NT68 2774 aa9.21□□□□□ -0.93
CLN6-225ENST00000638144 ZNF98A6NK75 572 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 FNDC10F2Z333 226 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 H3BRN7 92 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 HYPMO75409 117 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 AP2S1P53680 142 aaPredicted RBP9.21□□□□□ -0.94
CLN6-225ENST00000638144 APOC4P55056 127 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 CMC4P56277 68 aaPredicted RBP9.21□□□□□ -0.94
CLN6-225ENST00000638144 ACTL10Q5JWF8 245 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 STX12Q86Y82 276 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 PPP1R1CQ8WVI7 109 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 EDA2RQ9HAV5 297 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 UQCC1Q9NVA1 299 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 PFDN2Q9UHV9 154 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 HIGD1AQ9Y241 93 aa9.21□□□□□ -0.94
CLN6-225ENST00000638144 CFDP00746 253 aaPredicted RBP9.2□□□□□ -0.94
CLN6-225ENST00000638144 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
CLN6-225ENST00000638144 CXCL3P19876 107 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 EWSR1Q01844 656 aaKnown RBP eCLIP9.2□□□□□ -0.947e-6■■□□□ 12.2
CLN6-225ENST00000638144 NHLH2Q02577 135 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 BAXQ07812 192 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 CLINT1Q14677 625 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 C1orf194Q5T5A4 169 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 MIC13Q5XKP0 118 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 PATE2Q6UY27 113 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 STHQ8IWL8 128 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 C17orf77Q96MU5 243 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 LINC00052Q96N35 136 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 GGACTQ9BVM4 153 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 SLC25A39Q9BZJ4 359 aaPredicted RBP9.2□□□□□ -0.94
CLN6-225ENST00000638144 SLC45A2Q9UMX9 530 aa9.2□□□□□ -0.94
CLN6-225ENST00000638144 SOCS3O14543 225 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 CA1P00915 261 aaPredicted RBP9.19□□□□□ -0.94
CLN6-225ENST00000638144 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
CLN6-225ENST00000638144 FGF7P21781 194 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 CAMLGP49069 296 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 RAP2BP61225 183 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 SELENOTP62341 195 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 FGL1Q08830 312 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 FCN2Q15485 313 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 IGFL4Q6B9Z1 124 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 ZNF546Q86UE3 836 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 THAP6Q8TBB0 222 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 SHANK2-AS3Q9BTD1 123 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 RSG1Q9BU20 258 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 CSTL1Q9H114 145 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 MBD2Q9UBB5 411 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 FBXL17Q9UF56 701 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 WDR83OSQ9Y284 106 aa9.19□□□□□ -0.94
CLN6-225ENST00000638144 KIR2DL5BA0A0G2JN68 375 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 KIR2DL5BA0A0G2JPC4 375 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 E5RGE8 158 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 SPRY2O43597 315 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 MPC2O95563 127 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 RLN2P04090 185 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 C4BPBP20851 252 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 S100A11P31949 105 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 GALR1P47211 349 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 PLP1P60201 277 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 SNRPD3P62318 126 aaKnown RBP9.18□□□□□ -0.94
CLN6-225ENST00000638144 HBG1P69891 147 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 HBG2P69892 147 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 CYCSP99999 105 aaKnown RBP9.18□□□□□ -0.94
CLN6-225ENST00000638144 VWC2Q2TAL6 325 aa9.18□□□□□ -0.94
CLN6-225ENST00000638144 GDF5OSQ5U4N7 250 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms