RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 KBTBD11-OT1A0A1B0GTJ5 212 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 LOC102725191A0A1B0GVB3 256 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PQLC2LA1A4F0 135 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 ODAMA1E959 279 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM213A2RRL7 107 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 A6NDN8 102 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 MEIS3P1A6NDR6 274 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PRORSD1PA6NEY8 169 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 SDHAF1A6NFY7 115 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 KNCNA6PVL3 124 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 C17orf98A8MV24 154 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 IGLL5B9A064 214 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 E7EUB6 86 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 H3BN98 237 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 C3orf84H3BNL1 204 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 C15orf65H3BRN8 121 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 M0R1W7 72 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF593O00488 134 aaPredicted RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 SDCBPO00560 298 aaPredicted RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 GEMIN2O14893 280 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 LECT2O14960 151 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 UBDO15205 165 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 EDF1O60869 148 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CRTAPO75718 401 aaPredicted RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 UPK1BO75841 260 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 DHRS3O75911 302 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2F2O95006 317 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 GADD45GO95257 159 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 IGLV1-51P01701 117 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 IGLV3-1P01715 115 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TRGV3P03979 118 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CTSGP08311 255 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 LGALS1P09382 135 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 IFI6P09912 130 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 SAA1P0DJI8 122 aaPredicted RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF728P0DKX0 622 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 COX4I1P13073 169 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 FKBP2P26885 142 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 IL3RAP26951 378 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PSMB8P28062 276 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 HLA-DMBP28068 263 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PRSS3P35030 304 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 ASIPP42127 132 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PSMB2P49721 201 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 GTF2A1P52655 376 aaPredicted RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 BLVRAP53004 296 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 EMP1P54849 157 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CAV3P56539 151 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CLDN12P56749 244 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM33P57088 247 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR12D2P58182 307 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 DEFA1P59665 94 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 DEFA3P59666 94 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CXCR4P61073 352 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 RPL31P62899 125 aaKnown RBP0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PAFAH1B2P68402 229 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 HIST1H3AP68431 136 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 HLA-DRB3P79483 266 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CAV1Q03135 178 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 EMX2Q04743 252 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 FADDQ13158 208 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 GNA13Q14344 377 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PLGLAQ15195 96 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TNXAQ16473 311 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 WHAMMP3Q1A5X7 153 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 PDZD11Q5EBL8 140 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 BCL2L15Q5TBC7 163 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 HIST2H3PS2Q5TEC6 136 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 GDF5OSQ5U4N7 250 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM27BQ5VT28 67 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 ULK3Q6PHR2 472 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 DNM1P34Q6PK57 102 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF773Q6PK81 442 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 EPGNQ6UW88 154 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 CLEC19AQ6UXS0 136 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 LINC00336Q6ZUF6 198 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 HIST2H3AQ71DI3 136 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TCF24Q7RTU0 167 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC36A1Q7Z2H8 476 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 SPATA12Q7Z6I5 190 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 LINC00596Q86U02 117 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM86BQ8N661 226 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 Q8N6K4 173 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TRIML2Q8N7C3 387 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 YIPF7Q8N8F6 280 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF439Q8NDP4 499 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 LFNGQ8NES3 379 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR4C5Q8NGB2 326 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR51D1Q8NGF3 324 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR52L1Q8NGH7 329 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR5L1Q8NGL2 311 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR5K1Q8NHB7 308 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TEX47Q8TBZ9 253 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 MYOZ3Q8TDC0 251 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 THEM6Q8WUY1 208 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 TNFAIP8L1Q8WVP5 186 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 C4orf3Q8WVX3 66 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 DYDC1Q8WWB3 177 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 OR5P3Q8WZ94 311 aa0.49□□□□□ -2.33
SMARCB1-209ENST00000635578 LZICQ8WZA0 190 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms