RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 GPR107Q5VW38 600 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 ETFRF1Q6IPR1 90 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 TMEM182Q6ZP80 229 aaPredicted RBP9.01□□□□□ -0.97
LINC00339-206ENST00000634451 C6orf223Q8N319 242 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 MAGT1Q9H0U3 335 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 C14orf166Q9Y224 244 aaKnown RBP9.01□□□□□ -0.97
LINC00339-206ENST00000634451 LINC00588Q9Y4M8 146 aa9.01□□□□□ -0.97
LINC00339-206ENST00000634451 TRAV12-2A0A075B6T6 113 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 SULT1A3P0DMM9 295 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 SULT1A4P0DMN0 295 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 TBPP20226 339 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 GATA2P23769 480 aaPredicted RBP9□□□□□ -0.97
LINC00339-206ENST00000634451 FUSP35637 526 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00339-206ENST00000634451 ID1P41134 155 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 OR8G2PQ6IF36 304 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 LYZL2Q7Z4W2 148 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 LGI3Q8N145 548 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 Q8N1X5 172 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 RNF182Q8N6D2 247 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 OR4C16Q8NGL9 310 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 DTD1Q8TEA8 209 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 ATG101Q9BSB4 218 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 DOK5Q9P104 306 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 GPR132Q9UNW8 380 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 TMEM56-RWDD3S4R434 201 aa9□□□□□ -0.97
LINC00339-206ENST00000634451 FAT1Q14517 4588 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 A0A087WXM4 84 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 TRAV8-2A0A0B4J237 113 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 A8MTW9 85 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 F5H768 121 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 ISLRO14498 428 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 CNN1P51911 297 aaKnown RBP8.99□□□□□ -0.97
LINC00339-206ENST00000634451 CTF1Q16619 201 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 EBLN2Q6P2I7 272 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 OR8I2Q8N0Y5 310 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 OR11H7Q8NGC8 314 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 RNF141Q8WVD5 230 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 PPP1R14BQ96C90 147 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 C16orf92Q96LL3 132 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 IGF2BP2-AS1Q96M15 143 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 TMEM208Q9BTX3 173 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 SLC25A22Q9H936 323 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 SCRT2Q9NQ03 307 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 HSPB7Q9UBY9 170 aa8.99□□□□□ -0.97
LINC00339-206ENST00000634451 B3GALNT1O75752 331 aa8.98□□□□□ -0.97
LINC00339-206ENST00000634451 IAPPP10997 89 aa8.98□□□□□ -0.97
LINC00339-206ENST00000634451 C15orf53Q8NAA6 179 aa8.98□□□□□ -0.97
LINC00339-206ENST00000634451 OR51S1Q8NGJ8 323 aa8.98□□□□□ -0.97
LINC00339-206ENST00000634451 UHRF2Q96PU4 802 aa8.98□□□□□ -0.97
LINC00339-206ENST00000634451 RSG1Q9BU20 258 aa8.98□□□□□ -0.97
LINC00339-206ENST00000634451 SLC25A39Q9BZJ4 359 aaPredicted RBP8.98□□□□□ -0.97
LINC00339-206ENST00000634451 CTDSP2O14595 271 aa8.97□□□□□ -0.97
LINC00339-206ENST00000634451 C1orf194Q5T5A4 169 aa8.97□□□□□ -0.97
LINC00339-206ENST00000634451 SLC35E1Q96K37 410 aa8.97□□□□□ -0.97
LINC00339-206ENST00000634451 PAIP2BQ9ULR5 123 aaKnown RBP8.97□□□□□ -0.97
LINC00339-206ENST00000634451 U3KQ87 197 aa8.97□□□□□ -0.97
LINC00339-206ENST00000634451 GABARAPH6UMI1 98 aa8.96□□□□□ -0.98
LINC00339-206ENST00000634451 GABARAPO95166 117 aa8.96□□□□□ -0.98
LINC00339-206ENST00000634451 ZNF182P17025 639 aaPredicted RBP8.96□□□□□ -0.98
LINC00339-206ENST00000634451 DLK1P80370 383 aa8.96□□□□□ -0.98
LINC00339-206ENST00000634451 SMCO1Q147U7 214 aa8.96□□□□□ -0.98
LINC00339-206ENST00000634451 MZT2AQ6P582 158 aa8.96□□□□□ -0.98
LINC00339-206ENST00000634451 TRGV9Q99603 122 aa8.96□□□□□ -0.98
LINC00339-206ENST00000634451 VCX3AQ9NNX9 186 aa8.96□□□□□ -0.98
LINC00339-206ENST00000634451 RPRMQ9NS64 109 aa8.96□□□□□ -0.98
LINC00339-206ENST00000634451 ZNF98A6NK75 572 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 SNRPGP15A8MWD9 76 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 INSP01308 110 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 SMIM18P0DKX4 95 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 HTN1P15515 57 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 AKR1C4P17516 323 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 NUP62P37198 522 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-206ENST00000634451 CCR6P51684 374 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 FAM3BP58499 235 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-206ENST00000634451 KIR3DS1Q14943 382 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 SURF2Q15527 256 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-206ENST00000634451 SPATA31B1PQ5VZV4 182 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 SSX7Q7RTT5 188 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 THAP8Q8NA92 274 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 SMIM4Q8WVI0 70 aa8.95□□□□□ -0.98
LINC00339-206ENST00000634451 PARD6GQ9BYG4 376 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-206ENST00000634451 A0A0B4J2A0 478 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 DISC1C4P0D8 188 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 PRSS46E5RG02 174 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 ORM2P19652 201 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 GPX4P36969 197 aaPredicted RBP8.94□□□□□ -0.98
LINC00339-206ENST00000634451 FGL1Q08830 312 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 NOXA1Q86UR1 476 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 CLVS1Q8IUQ0 354 aaPredicted RBP8.94□□□□□ -0.98
LINC00339-206ENST00000634451 OR1S1Q8NH92 325 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 IL22RA2Q969J5 263 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 SHPKQ9UHJ6 478 aa8.94□□□□□ -0.98
LINC00339-206ENST00000634451 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
LINC00339-206ENST00000634451 FLG2Q5D862 2391 aaPredicted RBP8.93□□□□□ -0.98
LINC00339-206ENST00000634451 RGS5O15539 181 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms