RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 RPEL1Q2QD12 228 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 CENPWQ5EE01 88 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 ASPHD1Q5U4P2 390 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 DGAT2L7PQ6IED9 249 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 RNF2Q99496 336 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 SETXQ7Z333 2677 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 TRBV9A0A0B4J1U6 114 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 A0A1W2PRE2 83 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 NDUFB3O43676 98 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 MYCNOSP40205 109 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 C10orf55Q5SWW7 151 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 TMEM200BQ69YZ2 307 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 HCP5Q6MZN7 132 aa5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 ITLN2Q8WWU7 325 aaPredicted RBP5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 FLYWCH2Q96CP2 140 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 MRPL20Q9BYC9 149 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 MRPL18Q9H0U6 180 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 RNASE7Q9H1E1 156 aaKnown RBP5.78□□□□□ -1.48
CTNNA1-244ENST00000627109 TMEM238C9JI98 176 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 H3BTX0 84 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 USF1P22415 310 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 ADMP35318 185 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 LINC00310P59036 64 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 HLA-DRB5Q30154 266 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 PRR31Q5SQ13 230 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 OR2T6Q8NHC8 308 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 C22orf15Q8WYQ4 148 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 TMEM186Q96B77 213 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 TBX15Q96SF7 602 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 CBLN4Q9NTU7 201 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 TP53TG3Q9ULZ0 132 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 PAM16Q9Y3D7 125 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 MYO9AB2RTY4 2548 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 IGKV1D-37A0A075B6S9 117 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 SHISA9B4DS77 424 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 TMEM155Q4W5P6 130 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 LRRC10Q5BKY1 277 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 MMD2Q8IY49 270 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 SIGLECL1Q8N7X8 197 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 VN1R17PQ8TDU5 208 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 C14orf144Q96I85 54 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 HSPB9Q9BQS6 159 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 SLC25A33Q9BSK2 321 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 SLC25A2Q9BXI2 301 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 BEX4Q9NWD9 120 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 CRYBG3Q68DQ2 2970 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 MALRD1Q5VYJ5 2156 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 ABCA2Q9BZC7 2435 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 TRAV5A0A0B4J249 113 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 RBP4P02753 201 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 PRB4P10163 310 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 TPPP2P59282 170 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 RANP62826 216 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 RPL8P62917 257 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 BEND2Q8NDZ0 799 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 OR5AU1Q8NGC0 362 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 ZNF331Q9NQX6 463 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 OSTCQ9NRP0 149 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 JMJD1CQ15652 2540 aa5.77□□□□□ -1.49
CTNNA1-244ENST00000627109 CA1P00915 261 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 COX7A1P24310 79 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 LOXP28300 417 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 Q0VG73 95 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 ZNF664Q8N3J9 261 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 OR1B1Q8NGR6 318 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 TMEM190Q8WZ59 177 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 NPIPB3Q92617 1050 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 RNASE6Q93091 150 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 NOL4LQ96MY1 436 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 CHRDL1Q9BU40 450 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 ZFAND3Q9H8U3 227 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 TACC2O95359 2948 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 PPIAL4EA0A075B759 164 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 GGTLC3B5MD39 225 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 PPIAL4DF5H284 164 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 C19orf84I3L1E1 186 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 ISLRO14498 428 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 ZNF253O75346 499 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 PPIAL4FP0DN26 164 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 AMTP48728 403 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 SUB1P53999 127 aaKnown RBP eCLIP5.76□□□□□ -1.493e-9■■■■■ 34.7
CTNNA1-244ENST00000627109 UBE2G1P62253 170 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 FAM231DQ6ZW35 169 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 OR4C13Q8NGP0 309 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 C8orf46Q8TAG6 207 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 MBD6Q96DN6 1003 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 SMIM12Q96EX1 92 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 ATG101Q9BSB4 218 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 GNB1LQ9BYB4 327 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 C7orf69Q9H7B7 122 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 RETNQ9HD89 108 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 CTSZQ9UBR2 303 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 PPIAL4AQ9Y536 164 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 SMIM27A0A1W2PRY6 76 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 A8MWP6 167 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 E7EUB6 86 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 PPOXP50336 477 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 DLX1P56177 255 aa5.76□□□□□ -1.49
CTNNA1-244ENST00000627109 BSPH1Q075Z2 132 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms