RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 CCDC190Q86UF4 302 aa9.65□□□□□ -0.86
SOX2-OT-241ENST00000626948 LINC00052Q96N35 136 aa9.65□□□□□ -0.86
SOX2-OT-241ENST00000626948 NEU1Q99519 415 aa9.65□□□□□ -0.86
SOX2-OT-241ENST00000626948 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.86
SOX2-OT-241ENST00000626948 A0A1B0GVY2 172 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 DUXBA0A1W2PPF3 345 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 SFT2D2O95562 160 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 SLC25A6P12236 298 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 PAX9P55771 341 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 ATP5IP56385 69 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 SRPXP78539 464 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 AMTNQ6UX39 209 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 FOXI2Q6ZQN5 318 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 SLC35E1Q96K37 410 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 C1QTNF4Q9BXJ3 329 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 RBM38Q9H0Z9 239 aaKnown RBP9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 SLC25A32Q9H2D1 315 aa9.64□□□□□ -0.87
SOX2-OT-241ENST00000626948 A0A0J9YX75 114 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 PMS2P5A8MQ11 134 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 A8MTW9 85 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 SNRPGP15A8MWD9 76 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 PRM2P04554 102 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 ANXA3P12429 323 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 VAMP1P23763 118 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 PSMB3P49720 205 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 NUTF2P61970 127 aaKnown RBP9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 PYDC2Q56P42 97 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 FAM78BQ5VT40 261 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 TOMM5Q8N4H5 51 aa9.63□□□□□ -0.87
SOX2-OT-241ENST00000626948 RYR1P21817 5038 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 IGHV3OR16-12A0A075B7B8 117 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 TRAV8-2A0A0B4J237 113 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 H3BP45 60 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 WRBO00258 174 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 RTL8CO15255 209 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 SYNGR2O43760 224 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 ADAP1O75689 374 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 CCNKO75909 580 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 HOXB5P09067 269 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 EMP1P54849 157 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 GGNBP1Q5YKI7 109 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 IGFL4Q6B9Z1 124 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 OR4B1Q8NGF8 309 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 DKK2Q9UBU2 259 aa9.62□□□□□ -0.87
SOX2-OT-241ENST00000626948 ZNF98A6NK75 572 aa9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 ISLRO14498 428 aa9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 ID3Q02535 119 aa9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 BAK1Q16611 211 aa9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 OR8I2Q8N0Y5 310 aa9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 SDHCQ99643 169 aaPredicted RBP9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 SLC25A21Q9BQT8 299 aaPredicted RBP9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 SRRQ9GZT4 340 aa9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 PAIP2BQ9ULR5 123 aaKnown RBP9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 FLVCR2Q9UPI3 526 aa9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 TMED3Q9Y3Q3 217 aa9.61□□□□□ -0.87
SOX2-OT-241ENST00000626948 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 CRXO43186 299 aaPredicted RBP9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 PRB4P10163 310 aaPredicted RBP9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 FAUP35544 74 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 NUP62P37198 522 aaPredicted RBP9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 RAB11AP62491 216 aa9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 FAM222AQ5U5X8 452 aa9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 ACOT7LQ6ZUV0 252 aa9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 POM121L12Q8N7R1 296 aa9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 RSG1Q9BU20 258 aa9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 SLC25A22Q9H936 323 aa9.6□□□□□ -0.87
SOX2-OT-241ENST00000626948 C9orf170A2RU37 121 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 SMIM9A6NGZ8 99 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 SPART-AS1P0CW21 52 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 BTCP35070 178 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 ID1P41134 155 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 POLR2GP62487 172 aaKnown RBP eCLIP9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 PSG9Q00887 426 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 SPANXN5Q5MJ07 72 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 CENPSQ8N2Z9 138 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 RNF182Q8N6D2 247 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 OR4D5Q8NGN0 318 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 COQ8AQ8NI60 647 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 NDUFAF3Q9BU61 184 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 RFNGQ9Y644 331 aa9.59□□□□□ -0.87
SOX2-OT-241ENST00000626948 ABCA13Q86UQ4 5058 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 H3BRN7 92 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 M0R2N4 97 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 ORM2P19652 201 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 AP3S2P59780 193 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 PPP1R14BQ96C90 147 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 C16orf92Q96LL3 132 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 DOK5Q9P104 306 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 SLC45A2Q9UMX9 530 aa9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 YTHDF2Q9Y5A9 579 aaKnown RBP9.58□□□□□ -0.88
SOX2-OT-241ENST00000626948 LOC102723971A0A1B0GUV8 181 aa9.57□□□□□ -0.88
SOX2-OT-241ENST00000626948 PLAC8L1A1L4L8 177 aa9.57□□□□□ -0.88
SOX2-OT-241ENST00000626948 NOL3O60936 208 aaKnown RBP9.57□□□□□ -0.88
SOX2-OT-241ENST00000626948 MED6O75586 246 aa9.57□□□□□ -0.88
SOX2-OT-241ENST00000626948 NDUFB6O95139 128 aa9.57□□□□□ -0.88
SOX2-OT-241ENST00000626948 FABP1P07148 127 aa9.57□□□□□ -0.88
SOX2-OT-241ENST00000626948 CNN1P51911 297 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms