RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 NPVFQ9HCQ7 196 aa16.39■□□□□ 0.21
SF1-220ENST00000626028 CA1P00915 261 aaPredicted RBP16.38■□□□□ 0.21
SF1-220ENST00000626028 PSMG4Q5JS54 123 aa16.38■□□□□ 0.21
SF1-220ENST00000626028 S100A7AQ86SG5 101 aa16.38■□□□□ 0.21
SF1-220ENST00000626028 OR8I2Q8N0Y5 310 aa16.38■□□□□ 0.21
SF1-220ENST00000626028 PPP1R14BQ96C90 147 aa16.38■□□□□ 0.21
SF1-220ENST00000626028 GPR82Q96P67 336 aa16.38■□□□□ 0.21
SF1-220ENST00000626028 A0A0J9YWU9 116 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 C7orf66A4D0T2 115 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 K7EPK0 472 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 ID1P41134 155 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 MEOX2P50222 304 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 C2orf50Q96LR7 162 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 RARRES2Q99969 163 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 SEC22CQ9BRL7 303 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 MGAT4CQ9UBM8 478 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 RNF24Q9Y225 148 aa16.37■□□□□ 0.21
SF1-220ENST00000626028 METTL15P1P0C7V9 234 aa16.36■□□□□ 0.21
SF1-220ENST00000626028 PSMB3P49720 205 aa16.36■□□□□ 0.21
SF1-220ENST00000626028 PLP1P60201 277 aa16.36■□□□□ 0.21
SF1-220ENST00000626028 NUTF2P61970 127 aaKnown RBP16.36■□□□□ 0.21
SF1-220ENST00000626028 CYP2G1PQ6ZSU1 146 aa16.36■□□□□ 0.21
SF1-220ENST00000626028 ENKURQ8TC29 256 aa16.36■□□□□ 0.21
SF1-220ENST00000626028 TMEM147Q9BVK8 224 aa16.36■□□□□ 0.21
SF1-220ENST00000626028 SMCO3A2RU48 225 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 C5orf51A6NDU8 294 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 L7N2F9 121 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 ISLRO14498 428 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 GALR1P47211 349 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 VAMP2P63027 116 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 ACTL10Q5JWF8 245 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 TEPPQ6URK8 271 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 GSG1LQ6UXU4 331 aa16.35■□□□□ 0.21
SF1-220ENST00000626028 C11orf68Q9H3H3 251 aaKnown RBP16.35■□□□□ 0.21
SF1-220ENST00000626028 GPN1Q9HCN4 374 aaPredicted RBP16.35■□□□□ 0.21
SF1-220ENST00000626028 ZNF98A6NK75 572 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 FAM25EA8MYX2 175 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 CCSO14618 274 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 DEDDO75618 318 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 PVALBP20472 110 aaPredicted RBP16.34■□□□□ 0.21
SF1-220ENST00000626028 PXDC1Q5TGL8 231 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 SPATA31B1PQ5VZV4 182 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 OR1B1Q8NGR6 318 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 OR11H2Q8NH07 326 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 CLUHP3Q96NS8 147 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 C1QTNF4Q9BXJ3 329 aa16.34■□□□□ 0.21
SF1-220ENST00000626028 STARD9Q9P2P6 4700 aa16.33■□□□□ 0.2
SF1-220ENST00000626028 LCE6AA0A183 80 aa16.33■□□□□ 0.2
SF1-220ENST00000626028 KNCNA6PVL3 124 aa16.33■□□□□ 0.2
SF1-220ENST00000626028 ORM2P19652 201 aa16.33■□□□□ 0.2
SF1-220ENST00000626028 SOCS3O14543 225 aa16.32■□□□□ 0.2
SF1-220ENST00000626028 PRAF2O60831 178 aa16.32■□□□□ 0.2
SF1-220ENST00000626028 GIG44P09565 113 aaPredicted RBP16.32■□□□□ 0.2
SF1-220ENST00000626028 RAP2BP61225 183 aa16.32■□□□□ 0.2
SF1-220ENST00000626028 IL15RAQ13261 267 aa16.32■□□□□ 0.2
SF1-220ENST00000626028 TMEM182Q6ZP80 229 aaPredicted RBP16.32■□□□□ 0.2
SF1-220ENST00000626028 LYSTQ99698 3801 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 NUPR2A6NF83 97 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 H3BMM0 161 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 HYPMO75409 117 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 CCNKO75909 580 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 LINC00869P0C866 280 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 HLA-DRB4P13762 266 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 GATA2P23769 480 aaPredicted RBP16.31■□□□□ 0.2
SF1-220ENST00000626028 DEFA1P59665 94 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 DEFA3P59666 94 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 RRAS2P62070 204 aaPredicted RBP16.31■□□□□ 0.2
SF1-220ENST00000626028 ZNF546Q86UE3 836 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 HLA-DRB4X5D2U9 266 aa16.31■□□□□ 0.2
SF1-220ENST00000626028 FOXI2Q6ZQN5 318 aa16.3■□□□□ 0.2
SF1-220ENST00000626028 SLC25A32Q9H2D1 315 aa16.3■□□□□ 0.2
SF1-220ENST00000626028 C11orf1Q9H5F2 150 aa16.3■□□□□ 0.2
SF1-220ENST00000626028 HIGD1AQ9Y241 93 aa16.3■□□□□ 0.2
SF1-220ENST00000626028 LSM5Q9Y4Y9 91 aaKnown RBP16.3■□□□□ 0.2
SF1-220ENST00000626028 DYNC2H1Q8NCM8 4307 aaKnown RBP16.3■□□□□ 0.2
SF1-220ENST00000626028 H3BRN7 92 aa16.29■□□□□ 0.2
SF1-220ENST00000626028 RPL7P18124 248 aaKnown RBP16.29■□□□□ 0.2
SF1-220ENST00000626028 IFITM3Q01628 133 aa16.29■□□□□ 0.2
SF1-220ENST00000626028 SHANK2-AS3Q9BTD1 123 aa16.29■□□□□ 0.2
SF1-220ENST00000626028 SLC25A39Q9BZJ4 359 aaPredicted RBP16.29■□□□□ 0.2
SF1-220ENST00000626028 MFFQ9GZY8 342 aa16.29■□□□□ 0.2
SF1-220ENST00000626028 SAV1Q9H4B6 383 aaPredicted RBP16.29■□□□□ 0.2
SF1-220ENST00000626028 SLC25A22Q9H936 323 aa16.29■□□□□ 0.2
SF1-220ENST00000626028 LYRM2Q9NU23 88 aaPredicted RBP16.29■□□□□ 0.2
SF1-220ENST00000626028 ZNF705EA8MWA4 302 aaPredicted RBP16.28■□□□□ 0.2
SF1-220ENST00000626028 GOSR2O14653 212 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 JTBO76095 146 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 MIFP14174 115 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 C4BPBP20851 252 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 CAV2P51636 162 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 ARL16Q0P5N6 197 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 RAB31Q13636 194 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 CSNK1G2-AS1Q8NCQ2 148 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 MARVELD1Q9BSK0 173 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 RPRMQ9NS64 109 aa16.28■□□□□ 0.2
SF1-220ENST00000626028 CXorf65A6NEN9 183 aa16.27■□□□□ 0.2
SF1-220ENST00000626028 BCAP31P51572 246 aa16.27■□□□□ 0.2
SF1-220ENST00000626028 SLC38A11Q08AI6 406 aa16.27■□□□□ 0.2
SF1-220ENST00000626028 NRARPQ7Z6K4 114 aa16.27■□□□□ 0.2
SF1-220ENST00000626028 LINC00052Q96N35 136 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms