RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RBPMSQ93062 196 aaKnown RBP10.25□□□□□ -0.77
PNKP-218ENST00000625299 KRTAP1-5Q9BYS1 174 aa10.25□□□□□ -0.77
PNKP-218ENST00000625299 Q9H8V8 135 aa10.25□□□□□ -0.77
PNKP-218ENST00000625299 TEX13DA0A0J9YY54 714 aaPredicted RBP10.24□□□□□ -0.77
PNKP-218ENST00000625299 HPGDSO60760 199 aa10.24□□□□□ -0.77
PNKP-218ENST00000625299 B3GALNT1O75752 331 aa10.24□□□□□ -0.77
PNKP-218ENST00000625299 TTC32Q5I0X7 151 aa10.24□□□□□ -0.77
PNKP-218ENST00000625299 C1orf194Q5T5A4 169 aa10.24□□□□□ -0.77
PNKP-218ENST00000625299 AMTNQ6UX39 209 aa10.24□□□□□ -0.77
PNKP-218ENST00000625299 BAP18Q8IXM2 172 aa10.24□□□□□ -0.77
PNKP-218ENST00000625299 SELENOHQ8IZQ5 122 aaKnown RBP10.24□□□□□ -0.77
PNKP-218ENST00000625299 UHRF2Q96PU4 802 aa10.24□□□□□ -0.77
PNKP-218ENST00000625299 SLC25A22Q9H936 323 aa10.24□□□□□ -0.77
PNKP-218ENST00000625299 TRAV12-2A0A075B6T6 113 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 FAM25AB3EWG3 89 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 FAM25CB3EWG5 89 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 FAM25GB3EWG6 89 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 HTN1P15515 57 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 AZU1P20160 251 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 CNN1P51911 297 aaKnown RBP10.23□□□□□ -0.77
PNKP-218ENST00000625299 SAMD13Q5VXD3 122 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 OR11H7Q8NGC8 314 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 OR52I2Q8NH67 350 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 TERB2Q8NHR7 220 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 GLYATL2Q8WU03 294 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 SLC35E1Q96K37 410 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 NAA60Q9H7X0 242 aa10.23□□□□□ -0.77
PNKP-218ENST00000625299 C14orf166Q9Y224 244 aaKnown RBP10.23□□□□□ -0.77
PNKP-218ENST00000625299 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 SNRPGP15A8MWD9 76 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 GABARAPH6UMI1 98 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
PNKP-218ENST00000625299 GABARAPO95166 117 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 FABP1P07148 127 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 GALR1P47211 349 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 MEOX2P50222 304 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 LGI3Q8N145 548 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 RSG1Q9BU20 258 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 SLC25A32Q9H2D1 315 aa10.22□□□□□ -0.77
PNKP-218ENST00000625299 PLAC8L1A1L4L8 177 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 CBY3A6NI87 242 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 A8MTW9 85 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 RAB3DO95716 219 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 SULT1A3P0DMM9 295 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 SULT1A4P0DMN0 295 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 TSPOP30536 169 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 OR5I1Q13606 314 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 GAMTQ14353 236 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 IGFL4Q6B9Z1 124 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 DTD1Q8TEA8 209 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 YIPF6Q96EC8 236 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 LINC01587Q99440 93 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 Q9H3A6 140 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 PRR13Q9NZ81 148 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 U3KQ87 197 aa10.21□□□□□ -0.77
PNKP-218ENST00000625299 FAT1Q14517 4588 aa10.21□□□□□ -0.78
PNKP-218ENST00000625299 DUSP14O95147 198 aaKnown RBP10.2□□□□□ -0.78
PNKP-218ENST00000625299 ZNF182P17025 639 aaPredicted RBP10.2□□□□□ -0.78
PNKP-218ENST00000625299 TBPP20226 339 aa10.2□□□□□ -0.78
PNKP-218ENST00000625299 FUSP35637 526 aaKnown RBP eCLIP10.2□□□□□ -0.78
PNKP-218ENST00000625299 B2MP61769 119 aa10.2□□□□□ -0.78
PNKP-218ENST00000625299 FGL1Q08830 312 aa10.2□□□□□ -0.78
PNKP-218ENST00000625299 FAAP20Q6NZ36 180 aa10.2□□□□□ -0.78
PNKP-218ENST00000625299 GPR141Q7Z602 305 aa10.2□□□□□ -0.78
PNKP-218ENST00000625299 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
PNKP-218ENST00000625299 RTBDNQ9BSG5 229 aaPredicted RBP10.2□□□□□ -0.78
PNKP-218ENST00000625299 SLC25A39Q9BZJ4 359 aaPredicted RBP10.2□□□□□ -0.78
PNKP-218ENST00000625299 RBKSQ9H477 322 aa10.2□□□□□ -0.78
PNKP-218ENST00000625299 MTFP1Q9UDX5 166 aa10.2□□□□□ -0.78
PNKP-218ENST00000625299 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
PNKP-218ENST00000625299 A0A0J9YY99 117 aa10.19□□□□□ -0.78
PNKP-218ENST00000625299 BTF3P20290 206 aaKnown RBP10.19□□□□□ -0.78
PNKP-218ENST00000625299 TAS2R19P59542 299 aa10.19□□□□□ -0.78
PNKP-218ENST00000625299 NCS1P62166 190 aa10.19□□□□□ -0.78
PNKP-218ENST00000625299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.19□□□□□ -0.78
PNKP-218ENST00000625299 GNPNAT1Q96EK6 184 aaPredicted RBP10.19□□□□□ -0.78
PNKP-218ENST00000625299 ZNF586Q9NXT0 402 aa10.19□□□□□ -0.78
PNKP-218ENST00000625299 CACFD1Q9UGQ2 172 aa10.19□□□□□ -0.78
PNKP-218ENST00000625299 PAIP2BQ9ULR5 123 aaKnown RBP10.19□□□□□ -0.78
PNKP-218ENST00000625299 BOLA2-SMG1P6H3BVE0 249 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 GPX4P36969 197 aaPredicted RBP10.18□□□□□ -0.78
PNKP-218ENST00000625299 RHOBP62745 196 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 Q5VSD8 79 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 GPR107Q5VW38 600 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 STEAP1BQ6NZ63 245 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 TMEM229BQ8NBD8 167 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 ZNF738Q8NE65 137 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 C16orf74Q96GX8 76 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 NOP10Q9NPE3 64 aaKnown RBP10.18□□□□□ -0.78
PNKP-218ENST00000625299 PPP1R14DQ9NXH3 145 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 PTTG2Q9NZH5 202 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 EXTL2Q9UBQ6 330 aa10.18□□□□□ -0.78
PNKP-218ENST00000625299 CRYM-AS1A6NIL9 109 aa10.17□□□□□ -0.78
PNKP-218ENST00000625299 ZNF98A6NK75 572 aa10.17□□□□□ -0.78
PNKP-218ENST00000625299 VBP1P61758 197 aa10.17□□□□□ -0.78
PNKP-218ENST00000625299 HIST1H1AQ02539 215 aaPredicted RBP10.17□□□□□ -0.78
PNKP-218ENST00000625299 C17orf77Q96MU5 243 aa10.17□□□□□ -0.78
PNKP-218ENST00000625299 TRGV9Q99603 122 aa10.17□□□□□ -0.78
PNKP-218ENST00000625299 HSPB7Q9UBY9 170 aa10.17□□□□□ -0.78
PNKP-218ENST00000625299 TIMM8BQ9Y5J9 83 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms