RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 MDFIC2A0A1B0GVS7 189 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A7PA6NKC0 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A22PA8MWA6 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A12PA8MX19 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A23PA8MXZ1 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 CTLA4P16410 223 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 CT83Q5H943 113 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 LYRM7Q5U5X0 104 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 TEX45Q8NA69 505 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 CHCHD2Q9Y6H1 151 aaPredicted RBP7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A18PA6NE21 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A16PA6NEW6 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A9PA6NNJ1 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A5PA8MXJ8 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 SLC17A2O00624 439 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 PAGE4O60829 102 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 APOHP02749 345 aaPredicted RBP7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A15PP0C7V4 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 FAM90A14PP0C7W9 464 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 C3orf22Q8N5N4 141 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 IMMP1LQ96LU5 166 aa7.48□□□□□ -1.21
USB1-216ENST00000624720 PINLYPA6NC86 204 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 BMPR1BO00238 502 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 IGHMP01871 453 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 ASAH2BP0C7U1 165 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 TESK1Q15569 626 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 SPRNQ5BIV9 151 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 METRNQ9UJH8 293 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 BGLAPP02818 100 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 OPRK1P41145 380 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 CLDN17P56750 224 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 ZC2HC1BQ5TFG8 222 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 OR10AC1Q8NH08 325 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 MRPL24Q96A35 216 aaKnown RBP7.47□□□□□ -1.21
USB1-216ENST00000624720 LINC00479Q96M42 142 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 DEPPQ9NTK1 212 aa7.47□□□□□ -1.21
USB1-216ENST00000624720 ANKRD11Q6UB99 2663 aaPredicted RBP7.47□□□□□ -1.21
USB1-216ENST00000624720 CHEK1O14757 476 aa7.46□□□□□ -1.21
USB1-216ENST00000624720 APCSP02743 223 aa7.46□□□□□ -1.21
USB1-216ENST00000624720 RPS4XP62701 263 aaKnown RBP7.46□□□□□ -1.21
USB1-216ENST00000624720 LINC01620Q4KN68 170 aa7.46□□□□□ -1.21
USB1-216ENST00000624720 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.21
USB1-216ENST00000624720 ABHD12Q8N2K0 398 aa7.46□□□□□ -1.21
USB1-216ENST00000624720 TMEM171Q8WVE6 324 aa7.46□□□□□ -1.21
USB1-216ENST00000624720 MLST8Q9BVC4 326 aa7.46□□□□□ -1.21
USB1-216ENST00000624720 UQCRQO14949 82 aa7.46□□□□□ -1.22
USB1-216ENST00000624720 MPDU1O75352 247 aa7.46□□□□□ -1.22
USB1-216ENST00000624720 CFPP27918 469 aa7.46□□□□□ -1.22
USB1-216ENST00000624720 FAM231DQ6ZW35 169 aa7.46□□□□□ -1.22
USB1-216ENST00000624720 MBD3L2Q8NHZ7 208 aaPredicted RBP7.46□□□□□ -1.22
USB1-216ENST00000624720 ATRXP46100 2492 aa7.46□□□□□ -1.22
USB1-216ENST00000624720 SH2D7A6NKC9 451 aaPredicted RBP7.45□□□□□ -1.22
USB1-216ENST00000624720 RENP00797 406 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 FGF6P10767 208 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 NANOS3P60323 173 aaKnown RBP7.45□□□□□ -1.22
USB1-216ENST00000624720 ZNF672Q499Z4 452 aaPredicted RBP7.45□□□□□ -1.22
USB1-216ENST00000624720 TEN1Q86WV5 123 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 OR5C1Q8NGR4 320 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 DPH3Q96FX2 82 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 C1QTNF5Q9BXJ0 243 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 IL36BQ9NZH7 164 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 PYGO1Q9Y3Y4 419 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 DOCK10Q96BY6 2186 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 IGLL5B9A064 214 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 WISP2O76076 250 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 PATE4P0C8F1 98 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 WT1P19544 449 aaPredicted RBP7.45□□□□□ -1.22
USB1-216ENST00000624720 CFAP126Q5VTH2 177 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 LINC00526Q96FQ7 95 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 C2orf48Q96LS8 159 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 C9orf85Q96MD7 179 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 ADAMTS20P59510 1910 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 K7ERJ3 54 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 M0R2P5 195 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 GUSBP1Q15486 140 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 OR1C1Q15619 314 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 PHLDA1Q8WV24 401 aaPredicted RBP7.45□□□□□ -1.22
USB1-216ENST00000624720 Q96MF0 132 aa7.45□□□□□ -1.22
USB1-216ENST00000624720 F11RQ9Y624 299 aaKnown RBP7.45□□□□□ -1.22
USB1-216ENST00000624720 A0A1W2PQD3 144 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 K7ENP7 123 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 FRMD6-AS1P0C7T7 363 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 PFN2P35080 140 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 ZNF726P1Q15940 193 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 LINC01590Q5TEZ4 76 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 SLC25A47Q6Q0C1 308 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 DEFB127Q9H1M4 99 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 PROK2Q9HC23 129 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 KIAA1549Q9HCM3 1950 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 COL12A1Q99715 3063 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 J3QQQ9 107 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 CXCL13O43927 109 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
USB1-216ENST00000624720 PLGLB1Q02325 96 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 IGFBPL1Q8WX77 278 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 DLX4Q92988 240 aaPredicted RBP7.44□□□□□ -1.22
USB1-216ENST00000624720 ZNF837Q96EG3 531 aaPredicted RBP7.44□□□□□ -1.22
USB1-216ENST00000624720 ZNF286AQ9HBT8 521 aa7.44□□□□□ -1.22
USB1-216ENST00000624720 TNRC6BQ9UPQ9 1833 aaKnown RBP7.44□□□□□ -1.22
USB1-216ENST00000624720 NBEAQ8NFP9 2946 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms