RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 CCDC32Q9BV29 185 aa15.24■□□□□ 0.03
PCDHB4-202ENST00000623478 C11orf68Q9H3H3 251 aaKnown RBP15.24■□□□□ 0.03
PCDHB4-202ENST00000623478 SEPSECSQ9HD40 501 aaKnown RBP15.24■□□□□ 0.03
PCDHB4-202ENST00000623478 CLEC5AQ9NY25 188 aa15.24■□□□□ 0.03
PCDHB4-202ENST00000623478 GSKIPQ9P0R6 139 aa15.24■□□□□ 0.03
PCDHB4-202ENST00000623478 EPPK1P58107 5090 aaKnown RBP15.24■□□□□ 0.03
PCDHB4-202ENST00000623478 NUPR2A6NF83 97 aa15.23■□□□□ 0.03
PCDHB4-202ENST00000623478 FBXL17Q9UF56 701 aa15.23■□□□□ 0.03
PCDHB4-202ENST00000623478 RCL1Q9Y2P8 373 aaKnown RBP15.23■□□□□ 0.03
PCDHB4-202ENST00000623478 SOCS3O14543 225 aa15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 METTL15P1P0C7V9 234 aa15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 ORM2P19652 201 aa15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 CEMP1Q6PRD7 247 aaPredicted RBP15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 TMEM14EPQ6UXP3 125 aa15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 OR8I2Q8N0Y5 310 aa15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 BPIFCQ8NFQ6 507 aa15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 LINC00052Q96N35 136 aa15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 SEC22CQ9BRL7 303 aa15.22■□□□□ 0.03
PCDHB4-202ENST00000623478 H3BMM0 161 aa15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 CFDP00746 253 aaPredicted RBP15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 NANOS2P60321 138 aaKnown RBP15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 RRAS2P62070 204 aaPredicted RBP15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 TMEM41BQ5BJD5 291 aa15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 GDF5OSQ5U4N7 250 aa15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 TMEM144Q7Z5S9 345 aa15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 Q8NAQ8 132 aa15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 SLC25A32Q9H2D1 315 aa15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 SLC25A22Q9H936 323 aa15.21■□□□□ 0.03
PCDHB4-202ENST00000623478 MBPP02686 304 aaPredicted RBP15.2■□□□□ 0.02
PCDHB4-202ENST00000623478 CSNK1G2-AS1Q8NCQ2 148 aa15.2■□□□□ 0.02
PCDHB4-202ENST00000623478 OR1B1Q8NGR6 318 aa15.2■□□□□ 0.02
PCDHB4-202ENST00000623478 PHLDA1Q8WV24 401 aaPredicted RBP15.2■□□□□ 0.02
PCDHB4-202ENST00000623478 TBC1D24Q9ULP9 559 aa15.2■□□□□ 0.02
PCDHB4-202ENST00000623478 ZNF98A6NK75 572 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 FAM25EA8MYX2 175 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 HLA-DRB4P13762 266 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 PSMB3P49720 205 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 LINC00299Q6ZSB3 139 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 CYP2G1PQ6ZSU1 146 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 C11orf45Q8TAV5 145 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 ZNF431Q8TF32 576 aaPredicted RBP15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 TMEM147Q9BVK8 224 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 DOK5Q9P104 306 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 SLC45A2Q9UMX9 530 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 HLA-DRB4X5D2U9 266 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 X6R8D5 127 aa15.19■□□□□ 0.02
PCDHB4-202ENST00000623478 IGHV4-28A0A0C4DH34 117 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 C7orf66A4D0T2 115 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 ZNF705EA8MWA4 302 aaPredicted RBP15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 TSC22D2O75157 780 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 IL5P05113 134 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 ID1P41134 155 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 TAS2R30P59541 319 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 DLK1P80370 383 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 LINC00476Q8WZB0 136 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 C17orf77Q96MU5 243 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 SCRT1Q9BWW7 348 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 XCL2Q9UBD3 114 aa15.18■□□□□ 0.02
PCDHB4-202ENST00000623478 FAM240BA0A1B0GVZ2 78 aa15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 IGKV3-20P01619 116 aa15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 H2AFB2P0C5Z0 115 aa15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 RBMY1A1P0DJD3 496 aaKnown RBP15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 RBMY1CP0DJD4 496 aa15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 ARL16Q0P5N6 197 aa15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 ZNF846Q147U1 533 aa15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 RBMY1FQ15415 496 aaKnown RBP15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 OR10P1Q8NGE3 313 aa15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 S100ZQ8WXG8 99 aa15.17■□□□□ 0.02
PCDHB4-202ENST00000623478 ISLRO14498 428 aa15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 LINC00869P0C866 280 aa15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 GALR1P47211 349 aa15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 NUTF2P61970 127 aaKnown RBP15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 C20orf173Q96LM9 149 aa15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 RSG1Q9BU20 258 aa15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 MFFQ9GZY8 342 aa15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 SAV1Q9H4B6 383 aaPredicted RBP15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 MGAT4CQ9UBM8 478 aa15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 KLK5Q9Y337 293 aaPredicted RBP15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 LSM5Q9Y4Y9 91 aaKnown RBP15.16■□□□□ 0.02
PCDHB4-202ENST00000623478 C5orf51A6NDU8 294 aa15.15■□□□□ 0.02
PCDHB4-202ENST00000623478 F6UB75 175 aa15.15■□□□□ 0.02
PCDHB4-202ENST00000623478 H3BRN7 92 aa15.15■□□□□ 0.02
PCDHB4-202ENST00000623478 MIFP14174 115 aa15.15■□□□□ 0.02
PCDHB4-202ENST00000623478 SLC38A11Q08AI6 406 aa15.15■□□□□ 0.02
PCDHB4-202ENST00000623478 ASAH1Q13510 395 aa15.15■□□□□ 0.02
PCDHB4-202ENST00000623478 FOXI2Q6ZQN5 318 aa15.15■□□□□ 0.02
PCDHB4-202ENST00000623478 C12orf45Q8N5I9 185 aaPredicted RBP15.15■□□□□ 0.02
PCDHB4-202ENST00000623478 FNDC10F2Z333 226 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 K7EPK0 472 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 FXYD7P58549 80 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 MZT2BQ6NZ67 158 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 C16orf92Q96LL3 132 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 UHRF2Q96PU4 802 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 SHANK2-AS3Q9BTD1 123 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 C1QTNF4Q9BXJ3 329 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 SLC25A39Q9BZJ4 359 aaPredicted RBP15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 NPVFQ9HCQ7 196 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 HIGD1AQ9Y241 93 aa15.14■□□□□ 0.01
PCDHB4-202ENST00000623478 ELOA3CA0A087WX78 387 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms