RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ASCL4Q6XD76 172 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 LRTM2Q8N967 370 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 OR4D5Q8NGN0 318 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 SFRP2Q96HF1 295 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 MAP1LC3AQ9H492 121 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 CHD9Q3L8U1 2897 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 G3V318 75 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 MMP23AO75900 390 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 PPIFP30405 207 aaKnown RBP7.51□□□□□ -1.21
GGA3-223ENST00000621870 SYNJ2BPP57105 145 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 TMEM183BQ1AE95 376 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 TMEM97Q5BJF2 176 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 IGHV2-70DA0A0C4DH43 119 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 CFHR2P36980 270 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 NMSQ5H8A3 153 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 F11RQ9Y624 299 aaKnown RBP7.51□□□□□ -1.21
GGA3-223ENST00000621870 DSCAMO60469 2012 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 SHISA9B4DS77 424 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 LMO1P25800 156 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 VN1R17PQ8TDU5 208 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 SCRT1Q9BWW7 348 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 GGTLC1Q9BX51 225 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 MRPL18Q9H0U6 180 aaKnown RBP7.51□□□□□ -1.21
GGA3-223ENST00000621870 TNFRSF18Q9Y5U5 241 aa7.51□□□□□ -1.21
GGA3-223ENST00000621870 A0A0G2JRQ6 117 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 ADORA2A-AS1P86434 159 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 SAMD13Q5VXD3 122 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 Q6ZRM9 215 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 Q8TCH9 128 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 RNF114Q9Y508 228 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 COL6A3P12111 3177 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 C22orf46C9J442 243 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 DUSP14O95147 198 aaKnown RBP7.5□□□□□ -1.21
GGA3-223ENST00000621870 PRSS2P07478 247 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 CBLN1P23435 193 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 ZNF506Q5JVG8 444 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 ZNF562Q6V9R5 426 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 REC114Q7Z4M0 266 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 PAM16Q9Y3D7 125 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 A0A1B0GUT8 65 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 FAM90A9PA6NNJ1 464 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 ATP6V0E1O15342 81 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 CNTFRP26992 372 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 SPSB3Q6PJ21 355 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 TMEM136Q6ZRR5 245 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 BIVMQ86UB2 503 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 PLXNB1O43157 2135 aa7.5□□□□□ -1.21
GGA3-223ENST00000621870 NMUP48645 174 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 SIGLEC15Q6ZMC9 328 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 CIARTQ8N365 385 aaPredicted RBP7.49□□□□□ -1.21
GGA3-223ENST00000621870 C1orf147Q96MC9 270 aaPredicted RBP7.49□□□□□ -1.21
GGA3-223ENST00000621870 HSPB9Q9BQS6 159 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 PGPEP1LA6NFU8 196 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 NPIPB5A8MRT5 1133 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 LEPROTL1O95214 131 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 RPL35AP18077 110 aaKnown RBP7.49□□□□□ -1.21
GGA3-223ENST00000621870 Q8NA96 180 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 IGHV4-61A0A0C4DH41 118 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 MED12LQ86YW9 2145 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 EXOC3-AS1Q8N2X6 119 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 BEND2Q8NDZ0 799 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 OTORQ9NRC9 128 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 EPDR1Q9UM22 224 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 PSG8Q9UQ74 426 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 ZNF256Q9Y2P7 627 aaPredicted RBP7.49□□□□□ -1.21
GGA3-223ENST00000621870 A0A1W2PPI3 338 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 H7C1H1 209 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 RIPPLY3P57055 190 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 ERVK11-1P61568 191 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 ZNF124Q15973 351 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 FER1L6-AS1Q8NA97 138 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 RHPN1-AS1Q9BWJ2 59 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 GEMIN7Q9H840 131 aaKnown RBP7.49□□□□□ -1.21
GGA3-223ENST00000621870 SDF2L1Q9HCN8 221 aa7.49□□□□□ -1.21
GGA3-223ENST00000621870 FCN3O75636 299 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 HBBP68871 147 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 IGFL4Q6B9Z1 124 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 ATG101Q9BSB4 218 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 VSIRQ9H7M9 311 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 CDC42EP3Q9UKI2 254 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 LINC00587B1AMM8 73 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 DIRC3C9JPN6 131 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 SRP19P09132 144 aaKnown RBP7.48□□□□□ -1.21
GGA3-223ENST00000621870 SUMO2P61956 95 aaKnown RBP7.48□□□□□ -1.21
GGA3-223ENST00000621870 RNASE7Q9H1E1 156 aaKnown RBP7.48□□□□□ -1.21
GGA3-223ENST00000621870 PEF1Q9UBV8 284 aaKnown RBP7.48□□□□□ -1.21
GGA3-223ENST00000621870 IGHV4-30-2A0A087WSY4 118 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 A0A1W2PRE2 83 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 PSMB2P49721 201 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 TAS2R60P59551 318 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 ACTL10Q5JWF8 245 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 C1orf122Q6ZSJ8 110 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 TMEM183AQ8IXX5 376 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 UBE2E2Q96LR5 201 aa7.48□□□□□ -1.21
GGA3-223ENST00000621870 C18orf15Q96N68 181 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms