RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 CLINT1Q14677 625 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 ATP6V1FQ16864 119 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 PATE2Q6UY27 113 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 GBGT1Q8N5D6 347 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 THAP6Q8TBB0 222 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 MS4A6AQ9H2W1 248 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 TMEM231Q9H6L2 316 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 HSPB11Q9Y547 144 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 A8MZ25 164 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 CAMLGP49069 296 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 RAP2BP61225 183 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 PRR20EP86478 221 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 PRR20CP86479 221 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 PRR20DP86480 221 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 PRR20BP86481 221 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 PRR20AP86496 221 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 ZNF546Q86UE3 836 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 FAM24BQ8N5W8 94 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 DEFB125Q8N687 156 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 OR1B1Q8NGR6 318 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 NARS2Q96I59 477 aaKnown RBP10.66□□□□□ -0.7
CBWD3-217ENST00000621474 CITED4Q96RK1 184 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 DOK5Q9P104 306 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 FRMD6-AS1P0C7T7 363 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 TFPI2P48307 235 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 Q6ZNX1 250 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 OR2T35Q8NGX2 323 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 GRAMD2BQ96HH9 432 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 UHRF2Q96PU4 802 aa10.66□□□□□ -0.7
CBWD3-217ENST00000621474 OR4C46A6NHA9 309 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 ZNF98A6NK75 572 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 OR11H12B2RN74 326 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 H3BRN7 92 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 FGF7P21781 194 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 FGL1Q08830 312 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 OPCMLQ14982 345 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 MIC13Q5XKP0 118 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 SIGLEC15Q6ZMC9 328 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 TMEM37Q8WXS4 190 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 C17orf77Q96MU5 243 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 NPCDR1Q9BY65 106 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 SLC25A39Q9BZJ4 359 aaPredicted RBP10.65□□□□□ -0.7
CBWD3-217ENST00000621474 WFDC1Q9HC57 220 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 UBQLN2Q9UHD9 624 aa10.65□□□□□ -0.7
CBWD3-217ENST00000621474 AGRNO00468 2067 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 TRAV2A0A0B4J234 112 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 RNF222A6NCQ9 220 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 K7EQG2 157 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 RPL29P47914 159 aaKnown RBP10.64□□□□□ -0.71
CBWD3-217ENST00000621474 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
CBWD3-217ENST00000621474 C1orf194Q5T5A4 169 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 LEMD1Q68G75 181 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 LINC00322Q6ZN03 302 aaPredicted RBP10.64□□□□□ -0.71
CBWD3-217ENST00000621474 AQP10Q96PS8 301 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 ATP5SQ99766 215 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 FAM110AQ9BQ89 295 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 SCRT1Q9BWW7 348 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 WDR61Q9GZS3 305 aaKnown RBP10.64□□□□□ -0.71
CBWD3-217ENST00000621474 ARL6Q9H0F7 186 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 ARV1Q9H2C2 271 aa10.64□□□□□ -0.71
CBWD3-217ENST00000621474 HELTA6NFD8 242 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 HYPMO75409 117 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 NUP62P37198 522 aaPredicted RBP10.63□□□□□ -0.71
CBWD3-217ENST00000621474 ZNF124Q15973 351 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 MORN5Q5VZ52 161 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 WFDC3Q8IUB2 231 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 STXBP6Q8NFX7 210 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 SMIM3Q9BZL3 60 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 SLC25A32Q9H2D1 315 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 HIGD1AQ9Y241 93 aa10.63□□□□□ -0.71
CBWD3-217ENST00000621474 RBMY1BA6NDE4 496 aaKnown RBP10.62□□□□□ -0.71
CBWD3-217ENST00000621474 RBMY1EA6NEQ0 496 aaKnown RBP10.62□□□□□ -0.71
CBWD3-217ENST00000621474 SMLR1H3BR10 107 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 MPDU1O75352 247 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 OR5G3P0C626 314 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 RBMY1DP0C7P1 496 aaKnown RBP10.62□□□□□ -0.71
CBWD3-217ENST00000621474 AP2S1P53680 142 aaPredicted RBP10.62□□□□□ -0.71
CBWD3-217ENST00000621474 B2MP61769 119 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 SRD5A3Q9H8P0 318 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 SLC25A22Q9H936 323 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 NRN1Q9NPD7 142 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 TNFSF18Q9UNG2 199 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 RAB31Q13636 194 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 PXDC1Q5TGL8 231 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 SBSPONQ8IVN8 264 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 OR8I2Q8N0Y5 310 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 PPP1R14BQ96C90 147 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 SLC39A9Q9NUM3 307 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 FBXL17Q9UF56 701 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 PFDN2Q9UHV9 154 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 PXMP4Q9Y6I8 212 aa10.62□□□□□ -0.71
CBWD3-217ENST00000621474 FXYD6-FXYD2A0A087WZ82 144 aa10.61□□□□□ -0.71
CBWD3-217ENST00000621474 DNASE2O00115 360 aaPredicted RBP10.61□□□□□ -0.71
CBWD3-217ENST00000621474 SOCS3O14543 225 aa10.61□□□□□ -0.71
CBWD3-217ENST00000621474 MRPS12O15235 138 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms