RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 CELA1Q9UNI1 258 aa15.86■□□□□ 0.13
SRRT-218ENST00000620394 SNRPGP15A8MWD9 76 aa15.85■□□□□ 0.13
SRRT-218ENST00000620394 UBE2MP61081 183 aaKnown RBP15.85■□□□□ 0.13
SRRT-218ENST00000620394 GDF5OSQ5U4N7 250 aa15.85■□□□□ 0.13
SRRT-218ENST00000620394 ZNF705AQ6ZN79 300 aaPredicted RBP15.85■□□□□ 0.13
SRRT-218ENST00000620394 FOXI2Q6ZQN5 318 aa15.85■□□□□ 0.13
SRRT-218ENST00000620394 CENPSQ8N2Z9 138 aa15.85■□□□□ 0.13
SRRT-218ENST00000620394 SAV1Q9H4B6 383 aaPredicted RBP15.85■□□□□ 0.13
SRRT-218ENST00000620394 SYNGR2O43760 224 aa15.84■□□□□ 0.13
SRRT-218ENST00000620394 NEU1Q99519 415 aa15.84■□□□□ 0.13
SRRT-218ENST00000620394 SLC45A2Q9UMX9 530 aa15.84■□□□□ 0.13
SRRT-218ENST00000620394 FAT2Q9NYQ8 4349 aa15.83■□□□□ 0.12
SRRT-218ENST00000620394 IGHV4-4A0A075B6R2 117 aa15.83■□□□□ 0.12
SRRT-218ENST00000620394 ZNF705FA8MVS1 300 aaPredicted RBP15.83■□□□□ 0.12
SRRT-218ENST00000620394 CFDP00746 253 aaPredicted RBP15.83■□□□□ 0.12
SRRT-218ENST00000620394 ZNF705DP0CH99 300 aaPredicted RBP15.83■□□□□ 0.12
SRRT-218ENST00000620394 ZNF705BP0CI00 300 aaPredicted RBP15.83■□□□□ 0.12
SRRT-218ENST00000620394 ID1P41134 155 aa15.83■□□□□ 0.12
SRRT-218ENST00000620394 RPP30P78346 268 aaKnown RBP15.83■□□□□ 0.12
SRRT-218ENST00000620394 OR2F1Q13607 317 aa15.83■□□□□ 0.12
SRRT-218ENST00000620394 SRRQ9GZT4 340 aa15.83■□□□□ 0.12
SRRT-218ENST00000620394 ZNF701M0R085 212 aaPredicted RBP15.82■□□□□ 0.12
SRRT-218ENST00000620394 ISLRO14498 428 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 AMBPP02760 352 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 PAX9P55771 341 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 DEFB1P60022 68 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 C12orf74Q32Q52 190 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 SAMD13Q5VXD3 122 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 GGNBP1Q5YKI7 109 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 ZNF709Q8N972 641 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 RNF126Q9BV68 326 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 MAGT1Q9H0U3 335 aa15.82■□□□□ 0.12
SRRT-218ENST00000620394 CCDC160A6NGH7 325 aa15.81■□□□□ 0.12
SRRT-218ENST00000620394 PRSS29PA6NIE9 313 aa15.81■□□□□ 0.12
SRRT-218ENST00000620394 HOXB5P09067 269 aa15.81■□□□□ 0.12
SRRT-218ENST00000620394 SPATA31B1PQ5VZV4 182 aa15.81■□□□□ 0.12
SRRT-218ENST00000620394 PAIP2BQ9ULR5 123 aaKnown RBP15.81■□□□□ 0.12
SRRT-218ENST00000620394 WRBO00258 174 aa15.8■□□□□ 0.12
SRRT-218ENST00000620394 MEOX2P50222 304 aa15.8■□□□□ 0.12
SRRT-218ENST00000620394 SPANXN2Q5MJ10 180 aa15.8■□□□□ 0.12
SRRT-218ENST00000620394 OR8I2Q8N0Y5 310 aa15.8■□□□□ 0.12
SRRT-218ENST00000620394 COQ8AQ8NI60 647 aa15.8■□□□□ 0.12
SRRT-218ENST00000620394 PPP1R14BQ96C90 147 aa15.8■□□□□ 0.12
SRRT-218ENST00000620394 LINC00052Q96N35 136 aa15.8■□□□□ 0.12
SRRT-218ENST00000620394 DNAH2Q9P225 4427 aa15.8■□□□□ 0.12
SRRT-218ENST00000620394 SMIM9A6NGZ8 99 aa15.79■□□□□ 0.12
SRRT-218ENST00000620394 ACOT7LQ6ZUV0 252 aa15.79■□□□□ 0.12
SRRT-218ENST00000620394 C17orf77Q96MU5 243 aa15.79■□□□□ 0.12
SRRT-218ENST00000620394 SLC25A32Q9H2D1 315 aa15.79■□□□□ 0.12
SRRT-218ENST00000620394 C9orf170A2RU37 121 aa15.78■□□□□ 0.12
SRRT-218ENST00000620394 NAP1L6A6NFF2 107 aa15.78■□□□□ 0.12
SRRT-218ENST00000620394 A8MTW9 85 aa15.78■□□□□ 0.12
SRRT-218ENST00000620394 NDUFB6O95139 128 aa15.78■□□□□ 0.12
SRRT-218ENST00000620394 ID3Q02535 119 aa15.78■□□□□ 0.12
SRRT-218ENST00000620394 SPANXN5Q5MJ07 72 aa15.78■□□□□ 0.12
SRRT-218ENST00000620394 ABCA13Q86UQ4 5058 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 DEFB131BA0A096LNP1 70 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 A0A0J9YX75 114 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 TMEM189A5PLL7 270 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 ZNF98A6NK75 572 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 H3BP45 60 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 GALR1P47211 349 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 BPIFCQ8NFQ6 507 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 OR4D5Q8NGN0 318 aa15.77■□□□□ 0.12
SRRT-218ENST00000620394 STRAPQ9Y3F4 350 aaKnown RBP15.77■□□□□ 0.12
SRRT-218ENST00000620394 RTL8CO15255 209 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 ADAP1O75689 374 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 IGKV3-20P01619 116 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 P0DMU3 169 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 FAM231AP0DMU4 169 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 FAM231CP0DMU5 169 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 AKR1C1Q04828 323 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 BAK1Q16611 211 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 TMEM182Q6ZP80 229 aaPredicted RBP15.76■□□□□ 0.11
SRRT-218ENST00000620394 ZNF767PQ75MW2 155 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 TMEM144Q7Z5S9 345 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 POM121L12Q8N7R1 296 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 C20orf173Q96LM9 149 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 GPR82Q96P67 336 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 SLC35B3Q9H1N7 401 aa15.76■□□□□ 0.11
SRRT-218ENST00000620394 F6UB75 175 aa15.75■□□□□ 0.11
SRRT-218ENST00000620394 FXYD7P58549 80 aa15.75■□□□□ 0.11
SRRT-218ENST00000620394 PSG9Q00887 426 aa15.75■□□□□ 0.11
SRRT-218ENST00000620394 FAM78BQ5VT40 261 aa15.75■□□□□ 0.11
SRRT-218ENST00000620394 GSG1LQ6UXU4 331 aa15.75■□□□□ 0.11
SRRT-218ENST00000620394 OR4B1Q8NGF8 309 aa15.75■□□□□ 0.11
SRRT-218ENST00000620394 RPRMQ9NS64 109 aa15.75■□□□□ 0.11
SRRT-218ENST00000620394 RFNGQ9Y644 331 aa15.75■□□□□ 0.11
SRRT-218ENST00000620394 PMS2P5A8MQ11 134 aa15.74■□□□□ 0.11
SRRT-218ENST00000620394 GATA2P23769 480 aaPredicted RBP15.74■□□□□ 0.11
SRRT-218ENST00000620394 S100A7P31151 101 aa15.74■□□□□ 0.11
SRRT-218ENST00000620394 BTCP35070 178 aa15.74■□□□□ 0.11
SRRT-218ENST00000620394 POLR2GP62487 172 aaKnown RBP eCLIP15.74■□□□□ 0.11
SRRT-218ENST00000620394 TRIQKQ629K1 86 aa15.74■□□□□ 0.11
SRRT-218ENST00000620394 EBLN2Q6P2I7 272 aa15.74■□□□□ 0.11
SRRT-218ENST00000620394 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.74■□□□□ 0.11
SRRT-218ENST00000620394 OR1B1Q8NGR6 318 aa15.74■□□□□ 0.11
SRRT-218ENST00000620394 C16orf92Q96LL3 132 aa15.74■□□□□ 0.11
SRRT-218ENST00000620394 SDHCQ99643 169 aaPredicted RBP15.74■□□□□ 0.11
SRRT-218ENST00000620394 SLC25A22Q9H936 323 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms