RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 FABP9Q0Z7S8 132 aa16.92■□□□□ 0.3
SGMS1-210ENST00000619438 CCDC144NLQ6NUI1 221 aa16.92■□□□□ 0.3
SGMS1-210ENST00000619438 TMEM219Q86XT9 240 aa16.92■□□□□ 0.3
SGMS1-210ENST00000619438 IMMP2LQ96T52 175 aa16.92■□□□□ 0.3
SGMS1-210ENST00000619438 SRD5A3Q9H8P0 318 aa16.92■□□□□ 0.3
SGMS1-210ENST00000619438 TMEM116Q8NCL8 245 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 NPFFR1Q9GZQ6 430 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 F11RQ9Y624 299 aaKnown RBP16.91■□□□□ 0.3
SGMS1-210ENST00000619438 TRBV20OR9-2A0A075B6H5 130 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 A0A1W2PRE2 83 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 TIMM23O14925 209 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 GGCTO75223 188 aaKnown RBP16.91■□□□□ 0.3
SGMS1-210ENST00000619438 CD24P25063 80 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 MFAP2P55001 183 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 CFHR4Q92496 578 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 FAM167A-AS1Q96KT0 104 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 TRGV9Q99603 122 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 C16orf95Q9H693 158 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 PKD1L1Q8TDX9 2849 aa16.91■□□□□ 0.3
SGMS1-210ENST00000619438 A6NDX4 124 aa16.9■□□□□ 0.3
SGMS1-210ENST00000619438 PHOX2AO14813 284 aa16.9■□□□□ 0.3
SGMS1-210ENST00000619438 TRGC2P03986 189 aa16.9■□□□□ 0.3
SGMS1-210ENST00000619438 REG1AP05451 166 aa16.9■□□□□ 0.3
SGMS1-210ENST00000619438 SSBP2P81877 361 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-210ENST00000619438 TCEAL7Q9BRU2 100 aa16.9■□□□□ 0.3
SGMS1-210ENST00000619438 MRPL36Q9P0J6 103 aaKnown RBP16.9■□□□□ 0.3
SGMS1-210ENST00000619438 OOSP1A8MZH6 123 aa16.89■□□□□ 0.29
SGMS1-210ENST00000619438 COX7A2P2O60397 106 aa16.89■□□□□ 0.29
SGMS1-210ENST00000619438 HOXA5P20719 270 aa16.89■□□□□ 0.29
SGMS1-210ENST00000619438 NPBQ8NG41 125 aa16.89■□□□□ 0.29
SGMS1-210ENST00000619438 BTF3L4Q96K17 158 aa16.89■□□□□ 0.29
SGMS1-210ENST00000619438 FBXL15Q9H469 300 aa16.89■□□□□ 0.29
SGMS1-210ENST00000619438 ELOA3CA0A087WX78 387 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-210ENST00000619438 ZNF98A6NK75 572 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 OR7C2O60412 319 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BKO60814 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 NDUFA3O95167 84 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 TYMSP04818 313 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BJP06899 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BOP23527 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BBP33778 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BDP58876 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BCP62807 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST2H2BEQ16778 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-210ENST00000619438 C10orf113Q5VZT2 155 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 KCNIP4Q6PIL6 250 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 SRSF12Q8WXF0 261 aaKnown RBP16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BHQ93079 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BNQ99877 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 HIST1H2BMQ99879 126 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 SLC25A2Q9BXI2 301 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 PATE2Q6UY27 113 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 SGMS2Q8NHU3 365 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 WFDC12Q8WWY7 111 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 MISP3Q96FF7 219 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 SFRP2Q96HF1 295 aa16.88■□□□□ 0.29
SGMS1-210ENST00000619438 MEOX2P50222 304 aa16.87■□□□□ 0.29
SGMS1-210ENST00000619438 ZNF90Q03938 601 aa16.87■□□□□ 0.29
SGMS1-210ENST00000619438 OR2T10Q8NGZ9 312 aa16.87■□□□□ 0.29
SGMS1-210ENST00000619438 OR4X1Q8NH49 305 aa16.87■□□□□ 0.29
SGMS1-210ENST00000619438 MOSP00540 346 aa16.86■□□□□ 0.29
SGMS1-210ENST00000619438 FAM106CPP0CH98 169 aa16.86■□□□□ 0.29
SGMS1-210ENST00000619438 PROK1P58294 105 aa16.86■□□□□ 0.29
SGMS1-210ENST00000619438 OCC1Q8TAD7 63 aa16.86■□□□□ 0.29
SGMS1-210ENST00000619438 ELOVL1Q9BW60 279 aa16.86■□□□□ 0.29
SGMS1-210ENST00000619438 PPP5D1E7EU14 171 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 FCN1O00602 326 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 NBR2O15453 112 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 FAM3BP58499 235 aaPredicted RBP16.85■□□□□ 0.29
SGMS1-210ENST00000619438 PLP1P60201 277 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 NECAP1Q8NC96 275 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 C12orf57Q99622 126 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 PRSS22Q9GZN4 317 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 GGTLC3B5MD39 225 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 SMIM6P0DI80 62 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 CDX1P47902 265 aaPredicted RBP16.85■□□□□ 0.29
SGMS1-210ENST00000619438 HES1Q14469 280 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 PLGLAQ15195 96 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 MMDQ15546 238 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 MORN5Q5VZ52 161 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 TEX38Q6PEX7 206 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 STXBP6Q8NFX7 210 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 OR5AU1Q8NGC0 362 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 OR1L6Q8NGR2 347 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 FRZBQ92765 325 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 ZNF355PQ9NSJ1 428 aa16.85■□□□□ 0.29
SGMS1-210ENST00000619438 EAF1Q96JC9 268 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-210ENST00000619438 DMRT1Q9Y5R6 373 aa16.84■□□□□ 0.29
SGMS1-210ENST00000619438 IGHV3-48P01763 117 aa16.83■□□□□ 0.28
SGMS1-210ENST00000619438 TRGC1P0CF51 173 aa16.83■□□□□ 0.28
SGMS1-210ENST00000619438 BLCAPP62952 87 aa16.83■□□□□ 0.28
SGMS1-210ENST00000619438 UBE2L3P68036 154 aaKnown RBP16.83■□□□□ 0.28
SGMS1-210ENST00000619438 OR5T1Q8NG75 326 aa16.83■□□□□ 0.28
SGMS1-210ENST00000619438 PAXXQ9BUH6 204 aa16.83■□□□□ 0.28
SGMS1-210ENST00000619438 TRAV5A0A0B4J249 113 aa16.82■□□□□ 0.28
SGMS1-210ENST00000619438 HELTA6NFD8 242 aa16.82■□□□□ 0.28
SGMS1-210ENST00000619438 PGPEP1LA6NFU8 196 aa16.82■□□□□ 0.28
SGMS1-210ENST00000619438 I3L2K1 104 aa16.82■□□□□ 0.28
SGMS1-210ENST00000619438 NDUFA6P56556 154 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms