RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 TECRQ9NZ01 308 aaKnown RBP14.9□□□□□ -0.02
UPF3A-211ENST00000618700 RABAC1Q9UI14 185 aa14.9□□□□□ -0.02
UPF3A-211ENST00000618700 IGHV3-49A0A0A0MS15 119 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 IFNA5P01569 189 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 EIF2B2P49770 351 aaKnown RBP14.89□□□□□ -0.03
UPF3A-211ENST00000618700 EGFEM1PQ0D2K5 195 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 ZNF266Q14584 549 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 DEFB114Q30KQ6 69 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 MIC13Q5XKP0 118 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 KCNRGQ8N5I3 272 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 STPG3Q8N7X2 389 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 ST8SIA2Q92186 375 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 RHPN1-AS1Q9BWJ2 59 aa14.89□□□□□ -0.03
UPF3A-211ENST00000618700 CXCL2P19875 107 aa14.88□□□□□ -0.03
UPF3A-211ENST00000618700 BMI1P35226 326 aa14.88□□□□□ -0.03
UPF3A-211ENST00000618700 KPRPQ5T749 579 aaPredicted RBP14.88□□□□□ -0.03
UPF3A-211ENST00000618700 PXDC1Q5TGL8 231 aa14.88□□□□□ -0.03
UPF3A-211ENST00000618700 OR2K2Q8NGT1 345 aa14.88□□□□□ -0.03
UPF3A-211ENST00000618700 IGHV3OR16-13A0A075B7E8 117 aa14.87□□□□□ -0.03
UPF3A-211ENST00000618700 IGHV3-74A0A0B4J1X5 117 aa14.87□□□□□ -0.03
UPF3A-211ENST00000618700 ORM2P19652 201 aa14.87□□□□□ -0.03
UPF3A-211ENST00000618700 B2MP61769 119 aa14.87□□□□□ -0.03
UPF3A-211ENST00000618700 BEAN1Q3B7T3 259 aa14.87□□□□□ -0.03
UPF3A-211ENST00000618700 CD300EQ496F6 205 aaPredicted RBP14.87□□□□□ -0.03
UPF3A-211ENST00000618700 OR1B1Q8NGR6 318 aa14.87□□□□□ -0.03
UPF3A-211ENST00000618700 NARS2Q96I59 477 aaKnown RBP14.87□□□□□ -0.03
UPF3A-211ENST00000618700 RSG1Q9BU20 258 aa14.87□□□□□ -0.03
UPF3A-211ENST00000618700 PXMP4Q9Y6I8 212 aa14.87□□□□□ -0.03
UPF3A-211ENST00000618700 IGHV3-66A0A0C4DH42 116 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 A0A1W2PS18 150 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 TAAR5O14804 337 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 HYPMO75409 117 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 SCGB1C1Q8TD33 95 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 RNF2Q99496 336 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 ARL6Q9H0F7 186 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 TMEM231Q9H6L2 316 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 KCNIP2Q9NS61 270 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 SLC39A9Q9NUM3 307 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 DOK5Q9P104 306 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 SELENOKQ9Y6D0 94 aa14.86□□□□□ -0.03
UPF3A-211ENST00000618700 A0A0D9SG52 128 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 BUB3O43684 328 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 FAM90A2PQ658T7 463 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 RPL7L1Q6DKI1 246 aaKnown RBP14.85□□□□□ -0.03
UPF3A-211ENST00000618700 PATE2Q6UY27 113 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 TMEM61Q8N0U2 210 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 ZNF709Q8N972 641 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 GLMPQ8WWB7 406 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 HYLS1Q96M11 299 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 CYTL1Q9NRR1 136 aa14.85□□□□□ -0.03
UPF3A-211ENST00000618700 IZUMO1RA6ND01 250 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 C17orf112F2Z3M2 114 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 H3BRN7 92 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 KRTAP10-11P60412 298 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 LCN12Q6JVE5 192 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 C16orf54Q6UWD8 224 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 ARV1Q9H2C2 271 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 PFDN2Q9UHV9 154 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 HIGD1AQ9Y241 93 aa14.84□□□□□ -0.03
UPF3A-211ENST00000618700 ELOA3CA0A087WX78 387 aaPredicted RBP14.83□□□□□ -0.04
UPF3A-211ENST00000618700 BORCS7-ASMTA0A0B4J1R7 106 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 TRAV25A0A0B4J276 109 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 OR5G3P0C626 314 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 ZFP69Q49AA0 526 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 C1orf194Q5T5A4 169 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 Q6ZRG5 221 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 TMEM37Q8WXS4 190 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 GRAMD2BQ96HH9 432 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 UHRF2Q96PU4 802 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 ARPC5LQ9BPX5 153 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 SHANK2-AS3Q9BTD1 123 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 SLC25A39Q9BZJ4 359 aaPredicted RBP14.83□□□□□ -0.04
UPF3A-211ENST00000618700 TIMM9Q9Y5J7 89 aa14.83□□□□□ -0.04
UPF3A-211ENST00000618700 ZNF98A6NK75 572 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 BCL2L11O43521 198 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 COX7A2P2O60397 106 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 JTBO76095 146 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 CD5P06127 495 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 LGALSLQ3ZCW2 172 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-211ENST00000618700 TCF24Q7RTU0 167 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 HSD17B11Q8NBQ5 300 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 OR1L4Q8NGR5 311 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 PPP1R14BQ96C90 147 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 RFNGQ9Y644 331 aa14.82□□□□□ -0.04
UPF3A-211ENST00000618700 ZNF785A8K8V0 405 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 TSPAN4O14817 238 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 ATP6V0CP27449 155 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 S100A7P31151 101 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 GCSAMLQ5JQS6 135 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 C10orf113Q5VZT2 155 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 LAMTOR1Q6IAA8 161 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 TMUB2Q71RG4 321 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 S100A7AQ86SG5 101 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 PFDN5Q99471 154 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 PSMG3Q9BT73 122 aaPredicted RBP14.81□□□□□ -0.04
UPF3A-211ENST00000618700 SCRT1Q9BWW7 348 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 DNAJC4Q9NNZ3 241 aa14.81□□□□□ -0.04
UPF3A-211ENST00000618700 ZMAT5Q9UDW3 170 aaKnown RBP14.81□□□□□ -0.04
UPF3A-211ENST00000618700 FFAR4Q5NUL3 377 aa14.8□□□□□ -0.04
UPF3A-211ENST00000618700 RBPMS2Q6ZRY4 209 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms