RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 C12orf54Q6X4T0 127 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 ZNF600Q6ZNG1 722 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 SIGLECL1Q8N7X8 197 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 MS4A10Q96PG2 267 aa13.11□□□□□ -0.31
TRAPPC3-210ENST00000617904 PAGE4O60829 102 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 CEBPGP53567 150 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 BLCAPP62952 87 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 UBE2L3P68036 154 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 SRSF3P84103 164 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 OR5AU1Q8NGC0 362 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 OR4F5Q8NH21 305 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 ZNF502Q8TBZ5 544 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 ZNF418Q8TF45 676 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 TMEM37Q8WXS4 190 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 OR4F4Q96R69 305 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 JMJD8Q96S16 334 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 RARRES2Q99969 163 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 OR51M1Q9H341 326 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 GNB4Q9HAV0 340 aa13.1□□□□□ -0.31
TRAPPC3-210ENST00000617904 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 OR2C1O95371 312 aa13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 IGKV1-17P01599 117 aa13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 IL4P05112 153 aa13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 CRYBA1P05813 215 aa13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 SRP19P09132 144 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 RPL15P61313 204 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 C19orf54Q5BKX5 351 aa13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 C10orf91Q5T1B1 145 aa13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
TRAPPC3-210ENST00000617904 OR2T8A6NH00 312 aa13.08□□□□□ -0.32
TRAPPC3-210ENST00000617904 LINC01548A6NM66 108 aa13.08□□□□□ -0.32
TRAPPC3-210ENST00000617904 PPIFP30405 207 aaKnown RBP13.08□□□□□ -0.32
TRAPPC3-210ENST00000617904 TMPRSS5Q9H3S3 457 aa13.08□□□□□ -0.32
TRAPPC3-210ENST00000617904 RABAC1Q9UI14 185 aa13.08□□□□□ -0.32
TRAPPC3-210ENST00000617904 WI2-2373I1.2A0A1W2PRP0 233 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 PSMB11A5LHX3 300 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 TGOLN2O43493 480 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 CLEC3BP05452 202 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 GPR183P32249 361 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 SPATA31B1PQ5VZV4 182 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 CLEC19AQ6UXS0 136 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 BPIFA4PQ86YQ2 179 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 OR4F17Q8NGA8 305 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 RPUSD4Q96CM3 377 aaKnown RBP13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 TCEAL7Q9BRU2 100 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 SCRT1Q9BWW7 348 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
TRAPPC3-210ENST00000617904 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 HILS1P60008 231 aa13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 UBE2G2P60604 165 aa13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 TEX38Q6PEX7 206 aa13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 MRPL27Q9P0M9 148 aaKnown RBP13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 TMEM14CQ9P0S9 112 aa13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 PRELID1Q9Y255 219 aa13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 S4R3C0 116 aa13.06□□□□□ -0.32
TRAPPC3-210ENST00000617904 IGLV1-40P01703 118 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 IGHV3-23P01764 117 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 IGHG4P01861 327 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 ELANEP08246 267 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 CTSGP08311 255 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 PATE2Q6UY27 113 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 CYB561D1Q8N8Q1 229 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 NOL4LQ96MY1 436 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 GPR82Q96P67 336 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 SLC25A2Q9BXI2 301 aa13.05□□□□□ -0.32
TRAPPC3-210ENST00000617904 ZNF727A8MUV8 499 aa13.04□□□□□ -0.32
TRAPPC3-210ENST00000617904 CLDN34H7C241 214 aa13.04□□□□□ -0.32
TRAPPC3-210ENST00000617904 M0R036 132 aa13.04□□□□□ -0.32
TRAPPC3-210ENST00000617904 ARL3P36405 182 aa13.04□□□□□ -0.32
TRAPPC3-210ENST00000617904 FOXE3Q13461 319 aa13.04□□□□□ -0.32
TRAPPC3-210ENST00000617904 TVP23CQ96ET8 276 aa13.04□□□□□ -0.32
TRAPPC3-210ENST00000617904 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAPPC3-210ENST00000617904 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 B4DEV8 164 aa13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 H3BRN7 92 aa13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 EIF3GO75821 320 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 RHEBQ15382 184 aa13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 METTL26Q96S19 204 aa13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 SMIM7Q9BQ49 75 aa13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 TENM1Q9UKZ4 2725 aa13.03□□□□□ -0.32
TRAPPC3-210ENST00000617904 C9JQL5 133 aa13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 OR10J4P0C629 311 aa13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 NBEAP1P0C6P0 100 aa13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 BMI1P35226 326 aa13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 CD81P60033 236 aa13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 Q8N2B8 174 aa13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 FAM167A-AS1Q96KT0 104 aa13.02□□□□□ -0.33
TRAPPC3-210ENST00000617904 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.01□□□□□ -0.33
TRAPPC3-210ENST00000617904 TRAV5A0A0B4J249 113 aa13.01□□□□□ -0.33
TRAPPC3-210ENST00000617904 DNAJC9-AS1A6NH13 148 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms