RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 INO80CQ6PI98 192 aaPredicted RBP5.4□□□□□ -1.54
LMO3-235ENST00000616247 PCP2Q8IVA1 136 aa5.4□□□□□ -1.54
LMO3-235ENST00000616247 WIPF2Q8TF74 440 aaPredicted RBP5.4□□□□□ -1.54
LMO3-235ENST00000616247 CLUHP3Q96NS8 147 aa5.4□□□□□ -1.54
LMO3-235ENST00000616247 SPTBN1Q01082 2364 aaKnown RBP5.4□□□□□ -1.55
LMO3-235ENST00000616247 A0A1B0GUT8 65 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 G3V4G9 280 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 CECR9P0C854 216 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 SUB1P53999 127 aaKnown RBP eCLIP5.4□□□□□ -1.55
LMO3-235ENST00000616247 FAM120AOSQ5T036 256 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 ATP1A1-AS1Q5TC04 95 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 SAMD5Q5TGI4 173 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 ATP5L2Q7Z4Y8 100 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 ITLN1Q8WWA0 313 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 C19orf24Q9BVV8 132 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 Q9H3A6 140 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 NHP2Q9NX24 153 aaKnown RBP5.4□□□□□ -1.55
LMO3-235ENST00000616247 AKAP6Q13023 2319 aa5.4□□□□□ -1.55
LMO3-235ENST00000616247 COL5A1P20908 1838 aaPredicted RBP5.39□□□□□ -1.55
LMO3-235ENST00000616247 PPIAL4EA0A075B759 164 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 FAM90A9PA6NNJ1 464 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 K7EP34 96 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 M0R1B8 84 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 SLC25A17O43808 307 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 RBP4P02753 201 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 PPIAL4FP0DN26 164 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 RIGQ13278 110 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 PSG3Q16557 428 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 SPRNQ5BIV9 151 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 SFTA2Q6UW10 78 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 PATE2Q6UY27 113 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 FAM231DQ6ZW35 169 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 ZADH2Q8N4Q0 377 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 FAM216BQ8N7L0 139 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 OR10X1Q8NGY0 326 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 ZNF414Q96IQ9 312 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 NCOR1P1Q9H4R4 102 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 C1RLQ9NZP8 487 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 PILRBQ9UKJ0 227 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 TSSC4Q9Y5U2 329 aaPredicted RBP5.39□□□□□ -1.55
LMO3-235ENST00000616247 E7EUB6 86 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 SMKR1H3BMG3 65 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 SMIM13P0DJ93 91 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 LOXL3P58215 753 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 RPS20P60866 119 aaKnown RBP5.39□□□□□ -1.55
LMO3-235ENST00000616247 LOXL1Q08397 574 aaPredicted RBP5.39□□□□□ -1.55
LMO3-235ENST00000616247 C2orf91Q6ZV80 131 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 Q71RC1 249 aaPredicted RBP5.39□□□□□ -1.55
LMO3-235ENST00000616247 TMEM105Q8N8V8 129 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 MRPL20Q9BYC9 149 aaKnown RBP5.39□□□□□ -1.55
LMO3-235ENST00000616247 PRO3102Q9H379 93 aa5.39□□□□□ -1.55
LMO3-235ENST00000616247 MRPL36Q9P0J6 103 aaKnown RBP5.39□□□□□ -1.55
LMO3-235ENST00000616247 H3BRM9 83 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 CT45A6P0DMU7 189 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 CT45A5P0DMU8 189 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 CT45A7P0DMV0 189 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 RBPJQ06330 500 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 LCNL1Q6ZST4 164 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 BCL6BQ8N143 479 aaPredicted RBP5.38□□□□□ -1.55
LMO3-235ENST00000616247 GCSAMQ8N6F7 178 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 MAFAQ8NHW3 353 aaPredicted RBP5.38□□□□□ -1.55
LMO3-235ENST00000616247 FAM222BQ8WU58 562 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 FXYD5Q96DB9 178 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 ZNF747Q9BV97 191 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 DMDP11532 3685 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 KBTBD11-OT1A0A1B0GTJ5 212 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 D6R8Y8 96 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 M0R296 226 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 SP9P0CG40 484 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 CT45A10P0DMU9 189 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 ADAMTSL5Q6ZMM2 481 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 PRR7Q8TB68 274 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 NEU4Q8WWR8 484 aaPredicted RBP5.38□□□□□ -1.55
LMO3-235ENST00000616247 SIT1Q9Y3P8 196 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 NBASA2RRP1 2371 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 A0A1B0GXF2 115 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 A0A1W2PPM0 123 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 TCRBV4S1A1TA0A5B7 111 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 J3QR89 54 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 TCRAP04437 139 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 CCL3L1P16619 93 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 HSD52Q0P140 79 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 ETDBQ3ZM63 59 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 C2orf83Q53S99 150 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 AMTNQ6UX39 209 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 PRELID3AQ96N28 172 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 COL25A1Q9BXS0 654 aaPredicted RBP5.38□□□□□ -1.55
LMO3-235ENST00000616247 NPFFR1Q9GZQ6 430 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 SPRR3Q9UBC9 169 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 S4R3C0 116 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 DSCAML1Q8TD84 2053 aa5.38□□□□□ -1.55
LMO3-235ENST00000616247 TNRC6AQ8NDV7 1962 aaKnown RBP5.38□□□□□ -1.55
LMO3-235ENST00000616247 SMAD7O15105 426 aaKnown RBP5.37□□□□□ -1.55
LMO3-235ENST00000616247 FCGR2BP31994 310 aaPredicted RBP5.37□□□□□ -1.55
LMO3-235ENST00000616247 CKS2P33552 79 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 PLGLAQ15195 96 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 RNFT1Q5M7Z0 435 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 LINC01545Q5VT33 79 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 SH2D6Q7Z4S9 175 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms