RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 I3L2K1 104 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 HIST1H1BP16401 226 aaKnown RBP8.37□□□□□ -1.07
COL4A1-205ENST00000615732 NPBWR1P48145 328 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 UBE2G2P60604 165 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 C10orf113Q5VZT2 155 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 CST9LP1Q5W188 147 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 UNQ5815/PRO19632Q6UWF5 114 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 C5orf56Q8N8D9 126 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 OR5T1Q8NG75 326 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 SUN5Q8TC36 379 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 NIPSNAP3BQ9BS92 247 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 DNAJC4Q9NNZ3 241 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 TMEM167BQ9NRX6 74 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 PITPNC1Q9UKF7 332 aa8.37□□□□□ -1.07
COL4A1-205ENST00000615732 PUS1Q9Y606 427 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL4A1-205ENST00000615732 C11orf94C9JXX5 98 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 F6UZH7 168 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 K7EIM0 57 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 ATP6V0E1O15342 81 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 OR7C2O60412 319 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 NDUFS6O75380 124 aaKnown RBP8.36□□□□□ -1.07
COL4A1-205ENST00000615732 CLN5O75503 358 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 C8orf88P0DMB2 117 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 PF4V1P10720 104 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 CD33P20138 364 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 MFAP4P55083 255 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 ZNF90Q03938 601 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 KHDC1LQ5JSQ8 128 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 C9orf152Q5JTZ5 239 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 ASPHD1Q5U4P2 390 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 C10orf99Q6UWK7 81 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 PQLC2Q6ZP29 291 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 OR1B1Q8NGR6 318 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 TMEM68Q96MH6 324 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 HSPB9Q9BQS6 159 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 SEPSECSQ9HD40 501 aaKnown RBP8.36□□□□□ -1.07
COL4A1-205ENST00000615732 RPS10P5Q9NQ39 176 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 DMRT1Q9Y5R6 373 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 TENM3Q9P273 2699 aa8.36□□□□□ -1.07
COL4A1-205ENST00000615732 IGLV11-55A0A075B6I3 123 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 TRAV30A0A087WSZ9 112 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
COL4A1-205ENST00000615732 TMEM250H0YL14 139 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 M0QZK8 103 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 GNG7O60262 68 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 HYPMO75409 117 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 OR2J3O76001 311 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 PF4P02776 101 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 IGLC1P0CG04 106 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 ORM2P19652 201 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 LYZP61626 148 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 RHEBQ15382 184 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 ZNF674Q2M3X9 581 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 TIGITQ495A1 244 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 Q56UQ5 140 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 TCTEX1D4Q5JR98 221 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 OR5AU1Q8NGC0 362 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 TVP23CQ96ET8 276 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 UHRF2Q96PU4 802 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 TXNDC17Q9BRA2 123 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 C20orf24Q9BUV8 137 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 ZNF355PQ9NSJ1 428 aa8.35□□□□□ -1.07
COL4A1-205ENST00000615732 ZNF727A8MUV8 499 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 H3BQ15 152 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 K7EIL1 84 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 PDE6DO43924 150 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 EGR2P11161 476 aaPredicted RBP8.34□□□□□ -1.07
COL4A1-205ENST00000615732 CD81P60033 236 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
COL4A1-205ENST00000615732 FAM74A3Q4VXF1 159 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 FAM90A2PQ658T7 463 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 C16orf82Q7Z2V1 217 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
COL4A1-205ENST00000615732 FANCD2OSQ96PS1 177 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 SMIM7Q9BQ49 75 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 FBXL7Q9UJT9 491 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 HIGD1AQ9Y241 93 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 TMA7Q9Y2S6 64 aaKnown RBP8.34□□□□□ -1.07
COL4A1-205ENST00000615732 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
COL4A1-205ENST00000615732 PSMB11A5LHX3 300 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 FAM74A7A6NL05 159 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
COL4A1-205ENST00000615732 NUPL2O15504 423 aaKnown RBP8.33□□□□□ -1.08
COL4A1-205ENST00000615732 NDUFB8O95169 186 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 RD3LP0DJH9 198 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 HOXD3P31249 432 aaPredicted RBP8.33□□□□□ -1.08
COL4A1-205ENST00000615732 ATP5G3P48201 142 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 PNRC1Q12796 327 aaPredicted RBP8.33□□□□□ -1.08
COL4A1-205ENST00000615732 KIAA0141Q14154 515 aaPredicted RBP8.33□□□□□ -1.08
COL4A1-205ENST00000615732 LINC00305Q7Z4B0 112 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 S100A7AQ86SG5 101 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 STXBP6Q8NFX7 210 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 TMEM37Q8WXS4 190 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 PAXXQ9BUH6 204 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 SLC25A2Q9BXI2 301 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 SMCO4Q9NRQ5 59 aa8.33□□□□□ -1.08
COL4A1-205ENST00000615732 TRAV41A0A0B4J266 112 aa8.32□□□□□ -1.08
COL4A1-205ENST00000615732 WI2-2373I1.2A0A1W2PRP0 233 aa8.32□□□□□ -1.08
COL4A1-205ENST00000615732 C7orf77A4D0Y5 90 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms