RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 MBD3L5A6NJ08 208 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-212ENST00000615671 OVOL3O00110 214 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 C1orf122Q6ZSJ8 110 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 MBD3L2Q8NHZ7 208 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-212ENST00000615671 A0A096LPF7 62 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 F8WEM9 126 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 SMKR1H3BMG3 65 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 RHPN1-AS1Q9BWJ2 59 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 ESPL1Q14674 2120 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 H0YJW9 148 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 CMC4P56277 68 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-212ENST00000615671 TMEM155Q4W5P6 130 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 MBD3L1Q8WWY6 194 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 KLHDC3Q9BQ90 382 aa15.3■□□□□ 0.04
GABPB1-212ENST00000615671 NAA38Q9BRA0 125 aaKnown RBP15.3■□□□□ 0.04
GABPB1-212ENST00000615671 STAG3L3P0CL85 134 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 SSBP2P81877 361 aaPredicted RBP15.29■□□□□ 0.04
GABPB1-212ENST00000615671 TREML4Q6UXN2 200 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 TEX43Q6ZNM6 134 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 RFNGQ9Y644 331 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 E7EQL1 145 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 DKK1O94907 266 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 SLC25A48Q6ZT89 311 aaKnown RBP15.29■□□□□ 0.04
GABPB1-212ENST00000615671 NR2C2APQ86WQ0 139 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 MEGF9Q9H1U4 602 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 C5orf64Q2M2E5 130 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 MINOS1Q5TGZ0 78 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 LCN12Q6JVE5 192 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 TNFRSF14Q92956 283 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 CSTL1Q9H114 145 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 MINOS1-NBL1R4GNA1 71 aa15.29■□□□□ 0.04
GABPB1-212ENST00000615671 SRRM5B3KS81 715 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 F2Z2F3 143 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 DOCK4Q8N1I0 1966 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 MGST2Q99735 147 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 HGFACQ04756 655 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 CRYGSP22914 178 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 MORN3Q6PF18 240 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-212ENST00000615671 ZNF581Q9P0T4 197 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 KLK9Q9UKQ9 250 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 DMRT1Q9Y5R6 373 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 NABP1Q96AH0 204 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 ZNF48Q96MX3 618 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-212ENST00000615671 CLDN16Q9Y5I7 305 aa15.28■□□□□ 0.04
GABPB1-212ENST00000615671 HEPN1Q6WQI6 88 aa15.27■□□□□ 0.04
GABPB1-212ENST00000615671 NYNRINQ9P2P1 1898 aaKnown RBP15.27■□□□□ 0.04
GABPB1-212ENST00000615671 IGLV3-32A0A0A0MS00 114 aa15.27■□□□□ 0.04
GABPB1-212ENST00000615671 RPRMLQ8N4K4 120 aa15.27■□□□□ 0.04
GABPB1-212ENST00000615671 GHRHP01286 108 aa15.27■□□□□ 0.03
GABPB1-212ENST00000615671 SLC25A16P16260 332 aa15.27■□□□□ 0.03
GABPB1-212ENST00000615671 LYPD3O95274 346 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 MLANAQ16655 118 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 A0A1B0GWJ7 208 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 CEACAM8P31997 349 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-212ENST00000615671 ZNF138P52744 262 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 DAD1P61803 113 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 IFI27L1Q96BM0 104 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 TRAV8-1A0A0A6YYK1 113 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 GAGE12JA6NER3 117 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 A8MXK9 166 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 GAGE1Q13065 139 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 GAGE4Q13068 117 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 GAGE5Q13069 117 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 GAGE13Q4V321 117 aa15.26■□□□□ 0.03
GABPB1-212ENST00000615671 GREB1Q4ZG55 1949 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 PRDM13Q9H4Q3 707 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 XIRP1Q702N8 1843 aaKnown RBP15.25■□□□□ 0.03
GABPB1-212ENST00000615671 MSMBP08118 114 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 M0R1W7 72 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 BMPERQ8N8U9 685 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 SPXQ9BT56 116 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 A0A1W2PRE2 83 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 ATRAIDQ6UW56 229 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 WDR90Q96KV7 1748 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 RNF144BQ7Z419 303 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 MDS2Q8NDY4 140 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 TSKUQ8WUA8 353 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 GGTLC1Q9BX51 225 aa15.25■□□□□ 0.03
GABPB1-212ENST00000615671 SS18Q15532 418 aa15.24■□□□□ 0.03
GABPB1-212ENST00000615671 CACNA1IQ9P0X4 2223 aa15.24■□□□□ 0.03
GABPB1-212ENST00000615671 CSRP3P50461 194 aa15.24■□□□□ 0.03
GABPB1-212ENST00000615671 RPL32P62910 135 aaKnown RBP15.24■□□□□ 0.03
GABPB1-212ENST00000615671 ERG28Q9UKR5 140 aa15.24■□□□□ 0.03
GABPB1-212ENST00000615671 IGKV1D-17A0A075B6S4 117 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 FAM223BA6NKX1 122 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 LINC00473A8K010 186 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 J3QKU1 62 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 FAM223AQ8IWN6 122 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 PRTN3P24158 256 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 SPINK13Q1W4C9 94 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 ZNF362Q5T0B9 420 aaPredicted RBP15.23■□□□□ 0.03
GABPB1-212ENST00000615671 GFI1Q99684 422 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 MCRIP2Q9BUT9 160 aaKnown RBP15.23■□□□□ 0.03
GABPB1-212ENST00000615671 OSTCQ9NRP0 149 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 LINC01619G3V211 115 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 PAX9P55771 341 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 C5orf30Q96GV9 206 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 DOCK6Q96HP0 2047 aa15.23■□□□□ 0.03
GABPB1-212ENST00000615671 SIGLEC9Q9Y336 463 aa15.22■□□□□ 0.03
GABPB1-212ENST00000615671 LHBP01229 141 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms