RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 DOK5Q9P104 306 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 IGSF23A1L1A6 192 aa12.34□□□□□ -0.43
CBWD3-211ENST00000615061 AP2S1P53680 142 aaPredicted RBP12.34□□□□□ -0.43
CBWD3-211ENST00000615061 LRRC37A5PQ49AS3 106 aa12.34□□□□□ -0.43
CBWD3-211ENST00000615061 PPP1R14BQ96C90 147 aa12.34□□□□□ -0.43
CBWD3-211ENST00000615061 LYRM2Q9NU23 88 aaPredicted RBP12.34□□□□□ -0.43
CBWD3-211ENST00000615061 FNDC10F2Z333 226 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 SSNA1O43805 119 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 DEDDO75618 318 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
CBWD3-211ENST00000615061 CMC4P56277 68 aaPredicted RBP12.33□□□□□ -0.44
CBWD3-211ENST00000615061 TMEM252Q8N6L7 170 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 OR1B1Q8NGR6 318 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 NRN1Q9NPD7 142 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 TEPPQ6URK8 271 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 NMES1Q9C002 83 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 SLC25A22Q9H936 323 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 EDA2RQ9HAV5 297 aa12.33□□□□□ -0.44
CBWD3-211ENST00000615061 TENM2Q9NT68 2774 aa12.32□□□□□ -0.44
CBWD3-211ENST00000615061 H0YIZ8 118 aa12.32□□□□□ -0.44
CBWD3-211ENST00000615061 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
CBWD3-211ENST00000615061 LINC00869P0C866 280 aa12.32□□□□□ -0.44
CBWD3-211ENST00000615061 NUP62P37198 522 aaPredicted RBP12.32□□□□□ -0.44
CBWD3-211ENST00000615061 DEFB135Q30KP9 77 aa12.32□□□□□ -0.44
CBWD3-211ENST00000615061 OVOL2Q9BRP0 275 aa12.32□□□□□ -0.44
CBWD3-211ENST00000615061 GGACTQ9BVM4 153 aa12.32□□□□□ -0.44
CBWD3-211ENST00000615061 OR5AC2Q9NZP5 309 aa12.32□□□□□ -0.44
CBWD3-211ENST00000615061 PFDN2Q9UHV9 154 aa12.32□□□□□ -0.44
CBWD3-211ENST00000615061 ZNF98A6NK75 572 aa12.31□□□□□ -0.44
CBWD3-211ENST00000615061 KNCNA6PVL3 124 aa12.31□□□□□ -0.44
CBWD3-211ENST00000615061 PTTG1O95997 202 aa12.31□□□□□ -0.44
CBWD3-211ENST00000615061 SULT1A1P50225 295 aa12.31□□□□□ -0.44
CBWD3-211ENST00000615061 APOC4P55056 127 aa12.31□□□□□ -0.44
CBWD3-211ENST00000615061 PSMG4Q5JS54 123 aa12.31□□□□□ -0.44
CBWD3-211ENST00000615061 OR8I2Q8N0Y5 310 aa12.31□□□□□ -0.44
CBWD3-211ENST00000615061 MGST2Q99735 147 aa12.31□□□□□ -0.44
CBWD3-211ENST00000615061 AGPAT2O15120 278 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 C1orf194Q5T5A4 169 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 UHRF2Q96PU4 802 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 TMEM147Q9BVK8 224 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 SCRT1Q9BWW7 348 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 SLC25A32Q9H2D1 315 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 ALG5Q9Y673 324 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 KIR2DL5BA0A0G2JN68 375 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 KIR2DL5BA0A0G2JPC4 375 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 SELENOTP62341 195 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 KIR2DL5AQ8N109 375 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 KIR2DL5BQ8NHK3 375 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 PPP1R1CQ8WVI7 109 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 C17orf77Q96MU5 243 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 SLC45A2Q9UMX9 530 aa12.3□□□□□ -0.44
CBWD3-211ENST00000615061 OR5G3P0C626 314 aa12.29□□□□□ -0.44
CBWD3-211ENST00000615061 DEFB1P60022 68 aa12.29□□□□□ -0.44
CBWD3-211ENST00000615061 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
CBWD3-211ENST00000615061 STX12Q86Y82 276 aa12.29□□□□□ -0.44
CBWD3-211ENST00000615061 SLC25A39Q9BZJ4 359 aaPredicted RBP12.29□□□□□ -0.44
CBWD3-211ENST00000615061 ARL6Q9H0F7 186 aa12.29□□□□□ -0.44
CBWD3-211ENST00000615061 CSTL1Q9H114 145 aa12.29□□□□□ -0.44
CBWD3-211ENST00000615061 H3BRN7 92 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 HYPMO75409 117 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 PLP1P60201 277 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 CYCSP99999 105 aaKnown RBP12.28□□□□□ -0.44
CBWD3-211ENST00000615061 NHLH2Q02577 135 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 ACTL10Q5JWF8 245 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 Q6ZWC4 215 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 UQCC1Q9NVA1 299 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 FBXL17Q9UF56 701 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 HIGD1AQ9Y241 93 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 UBE2L5PA0A1B0GUS4 154 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 SOCS3O14543 225 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 RLN2P04090 185 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 CXCL3P19876 107 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 S100A11P31949 105 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 RAP2BP61225 183 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 VWC2Q2TAL6 325 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 ZNF546Q86UE3 836 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 STHQ8IWL8 128 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 MUC7Q8TAX7 377 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 WDR83OSQ9Y284 106 aa12.28□□□□□ -0.44
CBWD3-211ENST00000615061 E5RGE8 158 aa12.27□□□□□ -0.45
CBWD3-211ENST00000615061 UBE2CO00762 179 aa12.27□□□□□ -0.45
CBWD3-211ENST00000615061 CAMLGP49069 296 aa12.27□□□□□ -0.45
CBWD3-211ENST00000615061 SNRPD3P62318 126 aaKnown RBP12.27□□□□□ -0.45
CBWD3-211ENST00000615061 EWSR1Q01844 656 aaKnown RBP eCLIP12.27□□□□□ -0.45
CBWD3-211ENST00000615061 TRPT1Q86TN4 253 aaKnown RBP12.27□□□□□ -0.45
CBWD3-211ENST00000615061 RSG1Q9BU20 258 aa12.27□□□□□ -0.45
CBWD3-211ENST00000615061 RNF126Q9BV68 326 aa12.27□□□□□ -0.45
CBWD3-211ENST00000615061 ARV1Q9H2C2 271 aa12.27□□□□□ -0.45
CBWD3-211ENST00000615061 SPRY2O43597 315 aa12.26□□□□□ -0.45
CBWD3-211ENST00000615061 HBG1P69891 147 aa12.26□□□□□ -0.45
CBWD3-211ENST00000615061 HBG2P69892 147 aa12.26□□□□□ -0.45
CBWD3-211ENST00000615061 MIC13Q5XKP0 118 aa12.26□□□□□ -0.45
CBWD3-211ENST00000615061 RNF183Q96D59 192 aa12.26□□□□□ -0.45
CBWD3-211ENST00000615061 LINC00052Q96N35 136 aa12.26□□□□□ -0.45
CBWD3-211ENST00000615061 MPC2O95563 127 aa12.25□□□□□ -0.45
CBWD3-211ENST00000615061 CA1P00915 261 aaPredicted RBP12.25□□□□□ -0.45
CBWD3-211ENST00000615061 GALR1P47211 349 aa12.25□□□□□ -0.45
CBWD3-211ENST00000615061 BAXQ07812 192 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms