RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 RCC1LQ96I51 464 aaKnown RBP6.49□□□□□ -1.37
PSMB3-208ENST00000613870 RNF2Q99496 336 aa6.49□□□□□ -1.37
PSMB3-208ENST00000613870 CITED1Q99966 193 aa6.49□□□□□ -1.37
PSMB3-208ENST00000613870 MAP1LC3BQ9GZQ8 125 aa6.49□□□□□ -1.37
PSMB3-208ENST00000613870 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
PSMB3-208ENST00000613870 PRKDCP78527 4128 aaKnown RBP6.49□□□□□ -1.37
PSMB3-208ENST00000613870 ELOA3CA0A087WX78 387 aaPredicted RBP6.48□□□□□ -1.37
PSMB3-208ENST00000613870 CTXND1A0A1B0GTU2 59 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
PSMB3-208ENST00000613870 ZNF207O43670 478 aaKnown RBP6.48□□□□□ -1.37
PSMB3-208ENST00000613870 OR7C2O60412 319 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 TRBV12-3P01733 135 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 NMBP08949 121 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 LGALS1P09382 135 aaKnown RBP6.48□□□□□ -1.37
PSMB3-208ENST00000613870 CD28P10747 220 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 PROK1P58294 105 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 TAS2R45P59539 299 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 RPEL1Q2QD12 228 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 FAM106AQ4KMX7 169 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 SPATA31B1PQ5VZV4 182 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 HIST2H2BDQ6DRA6 164 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 TOMM20LQ6UXN7 152 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 MIR17HGQ75NE6 70 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 LINC00305Q7Z4B0 112 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 RPP25LQ8N5L8 163 aaKnown RBP6.48□□□□□ -1.37
PSMB3-208ENST00000613870 KLHL30-AS1Q8NEE0 82 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 GATAD1Q8WUU5 269 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 RAB24Q969Q5 203 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 RNF125Q96EQ8 232 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 NARS2Q96I59 477 aaKnown RBP6.48□□□□□ -1.37
PSMB3-208ENST00000613870 UBE2E2Q96LR5 201 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 ATP6V0BQ99437 205 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 TECRQ9NZ01 308 aaKnown RBP6.48□□□□□ -1.37
PSMB3-208ENST00000613870 RABAC1Q9UI14 185 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 FUT9Q9Y231 359 aa6.48□□□□□ -1.37
PSMB3-208ENST00000613870 DNAH3Q8TD57 4116 aa6.47□□□□□ -1.37
PSMB3-208ENST00000613870 HSPB1P04792 205 aaKnown RBP6.47□□□□□ -1.37
PSMB3-208ENST00000613870 ADMP35318 185 aa6.47□□□□□ -1.37
PSMB3-208ENST00000613870 COMMD7Q86VX2 200 aa6.47□□□□□ -1.37
PSMB3-208ENST00000613870 UHRF2Q96PU4 802 aa6.47□□□□□ -1.37
PSMB3-208ENST00000613870 METTL26Q96S19 204 aa6.47□□□□□ -1.37
PSMB3-208ENST00000613870 MRPL32Q9BYC8 188 aaKnown RBP6.47□□□□□ -1.37
PSMB3-208ENST00000613870 GNG13Q9P2W3 67 aa6.47□□□□□ -1.37
PSMB3-208ENST00000613870 IGHV3-49A0A0A0MS15 119 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 TRAV5A0A0B4J249 113 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 WI2-2373I1.2A0A1W2PRP0 233 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 SEC14L6B5MCN3 397 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 WIPF1O43516 503 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 CXorf1O96002 111 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 IFNA1P01562 189 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 ARL14EPLP0DKL9 152 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 C8orf88P0DMB2 117 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 NPPCP23582 126 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 CDX1P47902 265 aaPredicted RBP6.46□□□□□ -1.38
PSMB3-208ENST00000613870 USF2Q15853 346 aaPredicted RBP6.46□□□□□ -1.38
PSMB3-208ENST00000613870 ZNF726P1Q15940 193 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 NDUFA5Q16718 116 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 DEFB136Q30KP8 78 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 NSUN5P1Q3KNT7 163 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 KHDC3LQ587J8 217 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 LEMD1Q68G75 181 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 PATE2Q6UY27 113 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 IL34Q6ZMJ4 242 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 C18orf65Q6ZTR6 163 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 RNF152Q8N8N0 203 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 OR1N2Q8NGR9 330 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 C4orf3Q8WVX3 66 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 MBD3L1Q8WWY6 194 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 TMEM37Q8WXS4 190 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 MARC2Q969Z3 335 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 CITED2Q99967 270 aaPredicted RBP6.46□□□□□ -1.38
PSMB3-208ENST00000613870 SCRT1Q9BWW7 348 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 EIF5A2Q9GZV4 153 aaKnown RBP6.46□□□□□ -1.38
PSMB3-208ENST00000613870 SEPSECSQ9HD40 501 aaKnown RBP6.46□□□□□ -1.38
PSMB3-208ENST00000613870 RNF24Q9Y225 148 aa6.46□□□□□ -1.38
PSMB3-208ENST00000613870 TSSC4Q9Y5U2 329 aaPredicted RBP6.46□□□□□ -1.38
PSMB3-208ENST00000613870 NOTCH1P46531 2555 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 IGHV4OR15-8A0A075B7B6 117 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 A0A087WW49 117 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 IGHV3-66A0A0C4DH42 116 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 LINC01619G3V211 115 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 NDUFA4O00483 81 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 ZP3P21754 424 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 PLP1P60201 277 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 UBE2L3P68036 154 aaKnown RBP6.45□□□□□ -1.38
PSMB3-208ENST00000613870 KIAA0141Q14154 515 aaPredicted RBP6.45□□□□□ -1.38
PSMB3-208ENST00000613870 HAGHQ16775 308 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 TCTEX1D4Q5JR98 221 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 C8orf86Q6ZUL3 223 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 SLC7A5P1Q8MH63 180 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 OR8I2Q8N0Y5 310 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 OR11H1Q8NG94 326 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 GRAMD2BQ96HH9 432 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 DUX3Q96PT4 197 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 SHANK2-AS3Q9BTD1 123 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 PAXXQ9BUH6 204 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 SLC25A39Q9BZJ4 359 aaPredicted RBP6.45□□□□□ -1.38
PSMB3-208ENST00000613870 TMPRSS5Q9H3S3 457 aa6.45□□□□□ -1.38
PSMB3-208ENST00000613870 TREM1Q9NP99 234 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms