RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 A0A1W2PS18 150 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 TMEM213A2RRL7 107 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 C2orf70A6NJV1 201 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 COX7A2P2O60397 106 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 CBLN1P23435 193 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 CRYBB3P26998 211 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 BMI1P35226 326 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 FFAR4Q5NUL3 377 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 OR2G3Q8NGZ4 309 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 GATAD1Q8WUU5 269 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 MCRIP2Q9BUT9 160 aaKnown RBP11.19□□□□□ -0.62
CD48-203ENST00000613788 SLC25A32Q9H2D1 315 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 DOK5Q9P104 306 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 HIGD1AQ9Y241 93 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 IGHV7-4-1A0A0J9YVY3 117 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 FOLR2P14207 255 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 ACOT6Q3I5F7 207 aaPredicted RBP11.19□□□□□ -0.62
CD48-203ENST00000613788 C10orf113Q5VZT2 155 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 EIF5AL1Q6IS14 154 aaKnown RBP11.19□□□□□ -0.62
CD48-203ENST00000613788 SH3BGRL3Q9H299 93 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 TMEM231Q9H6L2 316 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 SMPXQ9UHP9 88 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 ANK2Q01484 3957 aa11.19□□□□□ -0.62
CD48-203ENST00000613788 MBP02144 154 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 CSN3P07498 182 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 SEC11BP0C7V7 166 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 C8orf88P0DMB2 117 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 SPP1P10451 314 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 IL34Q6ZMJ4 242 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 GRAMD2BQ96HH9 432 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 BOLA1Q9Y3E2 137 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 RFNGQ9Y644 331 aa11.18□□□□□ -0.62
CD48-203ENST00000613788 SEC14L6B5MCN3 397 aa11.17□□□□□ -0.62
CD48-203ENST00000613788 M6PRP20645 277 aa11.17□□□□□ -0.62
CD48-203ENST00000613788 TMEM37Q8WXS4 190 aa11.17□□□□□ -0.62
CD48-203ENST00000613788 ST8SIA2Q92186 375 aa11.17□□□□□ -0.62
CD48-203ENST00000613788 RNF2Q99496 336 aa11.17□□□□□ -0.62
CD48-203ENST00000613788 RHPN1-AS1Q9BWJ2 59 aa11.17□□□□□ -0.62
CD48-203ENST00000613788 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
CD48-203ENST00000613788 U3KQE9 123 aa11.17□□□□□ -0.62
CD48-203ENST00000613788 IGHV3-49A0A0A0MS15 119 aa11.16□□□□□ -0.62
CD48-203ENST00000613788 CHEK1O14757 476 aa11.16□□□□□ -0.62
CD48-203ENST00000613788 BUB3O43684 328 aa11.16□□□□□ -0.62
CD48-203ENST00000613788 SAP30O75446 220 aa11.16□□□□□ -0.62
CD48-203ENST00000613788 INSL3P51460 131 aa11.16□□□□□ -0.62
CD48-203ENST00000613788 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
CD48-203ENST00000613788 LINC00305Q7Z4B0 112 aa11.16□□□□□ -0.62
CD48-203ENST00000613788 VSIRQ9H7M9 311 aa11.16□□□□□ -0.62
CD48-203ENST00000613788 TECRQ9NZ01 308 aaKnown RBP11.16□□□□□ -0.62
CD48-203ENST00000613788 IGHV3OR16-13A0A075B7E8 117 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 IGHV3-74A0A0B4J1X5 117 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 ZNF98A6NK75 572 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 APOHP02749 345 aaPredicted RBP11.15□□□□□ -0.62
CD48-203ENST00000613788 GCSAMLQ5JQS6 135 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 AKR1C8PQ5T2L2 129 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 C1orf194Q5T5A4 169 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 C9orf66Q5T8R8 295 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 OR10G4Q8NGN3 311 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 OR10G9Q8NGN4 311 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 OR10G7Q8NGN6 311 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 DYNLRB2Q8TF09 96 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 UHRF2Q96PU4 802 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
CD48-203ENST00000613788 A0A1W2PPV4 95 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 UMAD1C9J7I0 102 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 H3BRN7 92 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 CD5P06127 495 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 EDN2P20800 178 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 RHOBP62745 196 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 TMEM41BQ5BJD5 291 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 ADAMTSL5Q6ZMM2 481 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 MRPL32Q9BYC8 188 aaKnown RBP11.14□□□□□ -0.63
CD48-203ENST00000613788 GPR61Q9BZJ8 451 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 RAB2AP61019 212 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 OR8I2Q8N0Y5 310 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 PHYHIPLQ96FC7 376 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 GPR82Q96P67 336 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 SLC25A22Q9H936 323 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 SEPSECSQ9HD40 501 aaKnown RBP11.14□□□□□ -0.63
CD48-203ENST00000613788 WNK1Q9H4A3 2382 aa11.14□□□□□ -0.63
CD48-203ENST00000613788 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
CD48-203ENST00000613788 SCRT1Q9BWW7 348 aa11.13□□□□□ -0.63
CD48-203ENST00000613788 RPRMQ9NS64 109 aa11.13□□□□□ -0.63
CD48-203ENST00000613788 MLXQ9UH92 298 aa11.13□□□□□ -0.63
CD48-203ENST00000613788 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
CD48-203ENST00000613788 HELTA6NFD8 242 aa11.12□□□□□ -0.63
CD48-203ENST00000613788 IGLV1-51P01701 117 aa11.12□□□□□ -0.63
CD48-203ENST00000613788 IGLL1P15814 213 aa11.12□□□□□ -0.63
CD48-203ENST00000613788 RPL7P18124 248 aaKnown RBP11.12□□□□□ -0.63
CD48-203ENST00000613788 TAS2R45P59539 299 aa11.12□□□□□ -0.63
CD48-203ENST00000613788 FAM122CQ6P4D5 195 aa11.12□□□□□ -0.63
CD48-203ENST00000613788 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
CD48-203ENST00000613788 RPP25LQ8N5L8 163 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms