RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 VCYO14598 125 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 TOMM40O96008 361 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 FAM223BA6NKX1 122 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 HTN3P15516 51 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 TMEM200BQ69YZ2 307 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 FAM223AQ8IWN6 122 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 SPANXA1Q9NS26 97 aa14.3□□□□□ -0.12
HMGXB3-206ENST00000613459 SPTA1P02549 2419 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 PPIFP30405 207 aaKnown RBP14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 FOXL2NBQ6ZUU3 175 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 ZNF664Q8N3J9 261 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 TMEM105Q8N8V8 129 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 GFRA4Q9GZZ7 299 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 RPL36AP83881 106 aaKnown RBP14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 SPATA31B1PQ5VZV4 182 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 ZNF562Q6V9R5 426 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 RPL36ALQ969Q0 106 aaKnown RBP14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 VGLL1Q99990 258 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 CHCHD5Q9BSY4 110 aa14.29□□□□□ -0.12
HMGXB3-206ENST00000613459 EFNA2O43921 213 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 LINC00158P58513 81 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 OR10W1Q8NGF6 305 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 PNRC2Q9NPJ4 139 aaKnown RBP14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 IGKV1-5P01602 117 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 C15orf32Q32M92 178 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 IGKV1-27A0A075B6S5 117 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 H0YJW9 148 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 SYS1-DBNDD2H3BUS1 97 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 C3orf79P0CE67 100 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 PRTN3P24158 256 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 TDGF1P3P51864 188 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 PSG3Q16557 428 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 LYZL1Q6UWQ5 148 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 CEP290O15078 2479 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 A0A1W2PRX2 142 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 PMS2P5A8MQ11 134 aa14.28□□□□□ -0.12
HMGXB3-206ENST00000613459 VMO1Q7Z5L0 202 aa14.27□□□□□ -0.12
HMGXB3-206ENST00000613459 NUP35Q8NFH5 326 aa14.27□□□□□ -0.12
HMGXB3-206ENST00000613459 RCHY1Q96PM5 261 aa14.27□□□□□ -0.12
HMGXB3-206ENST00000613459 RFNGQ9Y644 331 aa14.27□□□□□ -0.12
HMGXB3-206ENST00000613459 NPIPB5A8MRT5 1133 aa14.27□□□□□ -0.12
HMGXB3-206ENST00000613459 A0A0G2JMZ2 1700 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 LRRC37A2A6NM11 1700 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 TET1Q8NFU7 2136 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 CD5LO43866 347 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 C5orf64Q2M2E5 130 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 C2orf82Q6UX34 121 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 WDR90Q96KV7 1748 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 IGKV2-40A0A087WW87 121 aaPredicted RBP14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 TRAV40A0A0B4J280 105 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 TMEM8BA6NDV4 472 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 TNFRSF6BO95407 300 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 IGKV2D-40P01614 121 aaPredicted RBP14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 TEX43Q6ZNM6 134 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 RPP25LQ8N5L8 163 aaKnown RBP14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 SCN8AQ9UQD0 1980 aa14.27□□□□□ -0.13
HMGXB3-206ENST00000613459 CFPP27918 469 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 CD177Q8N6Q3 437 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 hDV102S1A0JD36 115 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 ASCL4Q6XD76 172 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 IGHV3-64A0A075B6Q5 118 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 MLNRO43193 412 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 CD59P13987 128 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 PDE6HQ13956 83 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 C1QTNF4Q9BXJ3 329 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 OTOFQ9HC10 1997 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 ALPK2Q86TB3 2170 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 A8MWP6 167 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 QRFPP83859 136 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 KIR3DS1Q14943 382 aa14.26□□□□□ -0.13
HMGXB3-206ENST00000613459 Q6P435 159 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 SCRT1Q9BWW7 348 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 DOCK4Q8N1I0 1966 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 SH2D1AO60880 128 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 TMEM256Q8N2U0 113 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 NCR2O95944 276 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 CLPSP04118 112 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 SPACA3Q8IXA5 215 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 LCTP09848 1927 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 B4DSR2 109 aa14.25□□□□□ -0.13
HMGXB3-206ENST00000613459 A0A087X0K7 114 aa14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 MBD3L4A6NDZ8 208 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 MBD3L3A6NE82 208 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 MBD3L5A6NJ08 208 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 PSPNO60542 156 aa14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 MBD3L2Q8NHZ7 208 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 HIST1H4AP62805 103 aaKnown RBP14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 MPV17L2Q567V2 206 aa14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 GATD1Q8NB37 220 aa14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 GAFA1Q96PS6 74 aa14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 ICE1Q9Y2F5 2266 aa14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 PDCD11Q14690 1871 aaKnown RBP14.24□□□□□ -0.13
HMGXB3-206ENST00000613459 MDS2Q8NDY4 140 aa14.23□□□□□ -0.13
HMGXB3-206ENST00000613459 DMRTC2Q8IXT2 367 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-206ENST00000613459 CST9LQ9H4G1 147 aa14.23□□□□□ -0.13
HMGXB3-206ENST00000613459 BUB1B-PAK6H3BSN5 160 aa14.23□□□□□ -0.13
HMGXB3-206ENST00000613459 TRAV8-1A0A0A6YYK1 113 aa14.23□□□□□ -0.13
HMGXB3-206ENST00000613459 KLF2Q9Y5W3 355 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-206ENST00000613459 FAM231BA6NCW3 169 aa14.22□□□□□ -0.13
HMGXB3-206ENST00000613459 TFF1P04155 84 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms