RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 MS4A6AQ9H2W1 248 aa12.41□□□□□ -0.42
IRF1-211ENST00000613424 WDR83OSQ9Y284 106 aa12.41□□□□□ -0.42
IRF1-211ENST00000613424 UBE2L5PA0A1B0GUS4 154 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 A8MZ25 164 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 DNASE2O00115 360 aaPredicted RBP12.4□□□□□ -0.42
IRF1-211ENST00000613424 LINC00869P0C866 280 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 RPL12P30050 165 aaKnown RBP12.4□□□□□ -0.42
IRF1-211ENST00000613424 NUP62P37198 522 aaPredicted RBP12.4□□□□□ -0.42
IRF1-211ENST00000613424 CAMLGP49069 296 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 PLP1P60201 277 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 RAB31Q13636 194 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 Q5BKY6 102 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 PPP1R14BQ96C90 147 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 WFDC10AQ9H1F0 79 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 DOK5Q9P104 306 aa12.4□□□□□ -0.42
IRF1-211ENST00000613424 HELTA6NFD8 242 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 FRMD6-AS1P0C7T7 363 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
IRF1-211ENST00000613424 RAP2BP61225 183 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 FGL1Q08830 312 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 ZNF546Q86UE3 836 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 B9D2Q9BPU9 175 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 TUBA4BQ9H853 241 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 UBQLN2Q9UHD9 624 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 HSPB11Q9Y547 144 aa12.39□□□□□ -0.43
IRF1-211ENST00000613424 HYPMO75409 117 aa12.38□□□□□ -0.43
IRF1-211ENST00000613424 CLINT1Q14677 625 aa12.38□□□□□ -0.43
IRF1-211ENST00000613424 C1orf194Q5T5A4 169 aa12.38□□□□□ -0.43
IRF1-211ENST00000613424 PATE2Q6UY27 113 aa12.38□□□□□ -0.43
IRF1-211ENST00000613424 SIGLEC15Q6ZMC9 328 aa12.38□□□□□ -0.43
IRF1-211ENST00000613424 STXBP6Q8NFX7 210 aa12.38□□□□□ -0.43
IRF1-211ENST00000613424 CHAC2Q8WUX2 184 aa12.38□□□□□ -0.43
IRF1-211ENST00000613424 ARL6Q9H0F7 186 aa12.38□□□□□ -0.43
IRF1-211ENST00000613424 TRAV2A0A0B4J234 112 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 ZNF98A6NK75 572 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 OR5G3P0C626 314 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 FGF7P21781 194 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 ODF3L2Q3SX64 289 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 MIC13Q5XKP0 118 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 GGTLC1Q9BX51 225 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 SRD5A3Q9H8P0 318 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 HIGD1AQ9Y241 93 aa12.37□□□□□ -0.43
IRF1-211ENST00000613424 K7EQG2 157 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 S100A7P31151 101 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 RPL29P47914 159 aaKnown RBP12.36□□□□□ -0.43
IRF1-211ENST00000613424 CMC4P56277 68 aaPredicted RBP12.36□□□□□ -0.43
IRF1-211ENST00000613424 PRR20EP86478 221 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 PRR20CP86479 221 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 PRR20DP86480 221 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 PRR20BP86481 221 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 PRR20AP86496 221 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 PXDC1Q5TGL8 231 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 OR8I2Q8N0Y5 310 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 FAM24BQ8N5W8 94 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 OR2T35Q8NGX2 323 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 DCANP1Q8TF63 244 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 CITED4Q96RK1 184 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 ASCL2Q99929 193 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 FAM110AQ9BQ89 295 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 SLC25A39Q9BZJ4 359 aaPredicted RBP12.36□□□□□ -0.43
IRF1-211ENST00000613424 SLC25A22Q9H936 323 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 FBXL17Q9UF56 701 aa12.36□□□□□ -0.43
IRF1-211ENST00000613424 RBMY1BA6NDE4 496 aaKnown RBP12.35□□□□□ -0.43
IRF1-211ENST00000613424 RBMY1EA6NEQ0 496 aaKnown RBP12.35□□□□□ -0.43
IRF1-211ENST00000613424 H3BRN7 92 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 MPDU1O75352 247 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 RBMY1DP0C7P1 496 aaKnown RBP12.35□□□□□ -0.43
IRF1-211ENST00000613424 OPCMLQ14982 345 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 LEMD1Q68G75 181 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 Q6ZRG5 221 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 SBSPONQ8IVN8 264 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 UHRF2Q96PU4 802 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 ATP5SQ99766 215 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 SHANK2-AS3Q9BTD1 123 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 SCRT1Q9BWW7 348 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 ARV1Q9H2C2 271 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 NRN1Q9NPD7 142 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 TGP01266 2768 aa12.35□□□□□ -0.43
IRF1-211ENST00000613424 LINC00322Q6ZN03 302 aaPredicted RBP12.34□□□□□ -0.43
IRF1-211ENST00000613424 S100A7AQ86SG5 101 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 APRG1Q8IVJ8 170 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 TMEM37Q8WXS4 190 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 NPCDR1Q9BY65 106 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 WDR61Q9GZS3 305 aaKnown RBP12.34□□□□□ -0.43
IRF1-211ENST00000613424 SLC25A32Q9H2D1 315 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 MAP6D1Q9H9H5 199 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 WFDC1Q9HC57 220 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 DNAJC4Q9NNZ3 241 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 PXMP4Q9Y6I8 212 aa12.34□□□□□ -0.43
IRF1-211ENST00000613424 HUWE1Q7Z6Z7 4374 aaKnown RBP12.33□□□□□ -0.44
IRF1-211ENST00000613424 ELOA3CA0A087WX78 387 aaPredicted RBP12.33□□□□□ -0.44
IRF1-211ENST00000613424 G3V3Q6 166 aa12.33□□□□□ -0.44
IRF1-211ENST00000613424 COX7A2P2O60397 106 aa12.33□□□□□ -0.44
IRF1-211ENST00000613424 B2MP61769 119 aa12.33□□□□□ -0.44
IRF1-211ENST00000613424 ZNF124Q15973 351 aa12.33□□□□□ -0.44
IRF1-211ENST00000613424 LINC00305Q7Z4B0 112 aa12.33□□□□□ -0.44
IRF1-211ENST00000613424 AQP10Q96PS8 301 aa12.33□□□□□ -0.44
IRF1-211ENST00000613424 SLC39A9Q9NUM3 307 aa12.33□□□□□ -0.44
IRF1-211ENST00000613424 GALR1P47211 349 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms