RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 MRPL27Q9P0M9 148 aaKnown RBP13.27□□□□□ -0.29
CNOT3-208ENST00000613073 KAAG1Q9UBP8 84 aa13.27□□□□□ -0.29
CNOT3-208ENST00000613073 PRSS46E5RG02 174 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 C11orf52Q96A22 123 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 ZNF355PQ9NSJ1 428 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 RALYQ9UKM9 306 aaKnown RBP13.26□□□□□ -0.29
CNOT3-208ENST00000613073 UPK2O00526 184 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 PLXNB1O43157 2135 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 APOA2P02652 100 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 DEFB125Q8N687 156 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 ZNF430Q9H8G1 570 aaPredicted RBP13.26□□□□□ -0.29
CNOT3-208ENST00000613073 OR7C2O60412 319 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 FOXA3P55318 350 aaPredicted RBP13.26□□□□□ -0.29
CNOT3-208ENST00000613073 POU2AF1Q16633 256 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 TMEM155Q4W5P6 130 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 PRNDQ9UKY0 176 aa13.26□□□□□ -0.29
CNOT3-208ENST00000613073 HSBP1L1C9JCN9 74 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 MT-CO2P00403 227 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 DLX6P56179 175 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 FOXE3Q13461 319 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 S100A7AQ86SG5 101 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 OR10W1Q8NGF6 305 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 C1orf159Q96HA4 380 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 TMEM70Q9BUB7 260 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 PLEKHA3Q9HB20 300 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 OSTCQ9NRP0 149 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 TEX50A0A1B0GTY4 177 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 IGHV1-8P0DP01 117 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 SLC25A34Q6PIV7 304 aa13.25□□□□□ -0.29
CNOT3-208ENST00000613073 IGHV3-72A0A0B4J1Y9 119 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 CORTO00230 105 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 IGFBP2P18065 325 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
CNOT3-208ENST00000613073 SMIM12Q96EX1 92 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 CSMD1Q96PZ7 3565 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 MPDU1O75352 247 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 UQCRFS1P47985 274 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 MOB3BQ86TA1 216 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 OR5AN1Q8NGI8 311 aa13.24□□□□□ -0.29
CNOT3-208ENST00000613073 FNDC4Q9H6D8 234 aaPredicted RBP13.24□□□□□ -0.29
CNOT3-208ENST00000613073 AKAP6Q13023 2319 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 GGTLC3B5MD39 225 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 NABP2Q9BQ15 211 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 LY96Q9Y6Y9 160 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 PKD1L2Q7Z442 2459 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 SMIM27A0A1W2PRY6 76 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 PRCDQ00LT1 54 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 OSR1Q8TAX0 266 aaPredicted RBP13.23□□□□□ -0.29
CNOT3-208ENST00000613073 NPVFQ9HCQ7 196 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 NAV3Q8IVL0 2385 aa13.23□□□□□ -0.29
CNOT3-208ENST00000613073 E7EUB6 86 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 IGLV2-8P01709 118 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 OR9G1Q8NH87 305 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 RITA1Q96K30 269 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 SPTAN1Q13813 2472 aaKnown RBP13.22□□□□□ -0.29
CNOT3-208ENST00000613073 ISLRO14498 428 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 ENSAO43768 121 aaKnown RBP13.22□□□□□ -0.29
CNOT3-208ENST00000613073 TCTAP57738 103 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 MLANAQ16655 118 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 TMEM186Q96B77 213 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 TMEM133Q9H2Q1 129 aa13.22□□□□□ -0.29
CNOT3-208ENST00000613073 COX19Q49B96 90 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 CHRDL1Q9BU40 450 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 COMMD5Q9GZQ3 224 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 ZNF257Q9Y2Q1 563 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 GAGE10A6NGK3 116 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 C10orf55Q5SWW7 151 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 TEPPQ6URK8 271 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 NUP35Q8NFH5 326 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 OR4C13Q8NGP0 309 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 URB1-AS1Q96HZ7 61 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 SGK494Q96LW2 274 aa13.21□□□□□ -0.29
CNOT3-208ENST00000613073 AREGP15514 252 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 PPOXP50336 477 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 FAM71F2Q6NXP2 309 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 C12orf54Q6X4T0 127 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 FER1L6-AS1Q8NA97 138 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 OR1B1Q8NGR6 318 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 ST20Q9HBF5 79 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 C7orf71A4D174 169 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 TMEM177Q53S58 311 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 LINC00311Q8N616 119 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 LSM4Q9Y4Z0 139 aaKnown RBP13.2□□□□□ -0.3
CNOT3-208ENST00000613073 MED13LQ71F56 2210 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 COX7A1P24310 79 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 Q5PR19 223 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 LHFPL4Q7Z7J7 247 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 TPSG1Q9NRR2 321 aa13.2□□□□□ -0.3
CNOT3-208ENST00000613073 PPIAL4CA0A0B4J2A2 164 aa13.19□□□□□ -0.3
CNOT3-208ENST00000613073 FAM231BA6NCW3 169 aa13.19□□□□□ -0.3
CNOT3-208ENST00000613073 SYS1-DBNDD2H3BUS1 97 aa13.19□□□□□ -0.3
CNOT3-208ENST00000613073 SLC25A17O43808 307 aa13.19□□□□□ -0.3
CNOT3-208ENST00000613073 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
CNOT3-208ENST00000613073 PPIAL4GP0DN37 164 aa13.19□□□□□ -0.3
CNOT3-208ENST00000613073 ZNF138P52744 262 aa13.19□□□□□ -0.3
CNOT3-208ENST00000613073 RPS20P60866 119 aaKnown RBP13.19□□□□□ -0.3
CNOT3-208ENST00000613073 PDPNQ86YL7 162 aa13.19□□□□□ -0.3
CNOT3-208ENST00000613073 ZNF503Q96F45 646 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms