RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CMC4P56277 68 aaPredicted RBP10.7□□□□□ -0.7
CTSA-219ENST00000607841 C1orf194Q5T5A4 169 aa10.7□□□□□ -0.7
CTSA-219ENST00000607841 C16orf54Q6UWD8 224 aa10.7□□□□□ -0.7
CTSA-219ENST00000607841 TMEM182Q6ZP80 229 aaPredicted RBP10.7□□□□□ -0.7
CTSA-219ENST00000607841 Q8N1Y9 231 aa10.7□□□□□ -0.7
CTSA-219ENST00000607841 OR1B1Q8NGR6 318 aa10.7□□□□□ -0.7
CTSA-219ENST00000607841 FBXL17Q9UF56 701 aa10.7□□□□□ -0.7
CTSA-219ENST00000607841 HSPB11Q9Y547 144 aa10.7□□□□□ -0.7
CTSA-219ENST00000607841 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
CTSA-219ENST00000607841 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
CTSA-219ENST00000607841 DNASE2O00115 360 aaPredicted RBP10.69□□□□□ -0.7
CTSA-219ENST00000607841 PLP1P60201 277 aa10.69□□□□□ -0.7
CTSA-219ENST00000607841 CLINT1Q14677 625 aa10.69□□□□□ -0.7
CTSA-219ENST00000607841 Q6ZRG5 221 aa10.69□□□□□ -0.7
CTSA-219ENST00000607841 OR2T35Q8NGX2 323 aa10.69□□□□□ -0.7
CTSA-219ENST00000607841 MGST2Q99735 147 aa10.69□□□□□ -0.7
CTSA-219ENST00000607841 RNF24Q9Y225 148 aa10.69□□□□□ -0.7
CTSA-219ENST00000607841 CD7P09564 240 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 FGF7P21781 194 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 TFPI2P48307 235 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 SIGLEC15Q6ZMC9 328 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 GBGT1Q8N5D6 347 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 CHAC2Q8WUX2 184 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 GLMPQ8WWB7 406 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 ATP5SQ99766 215 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 ARL6Q9H0F7 186 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 MS4A6AQ9H2W1 248 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 TUBA4BQ9H853 241 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 HIGD1AQ9Y241 93 aa10.68□□□□□ -0.7
CTSA-219ENST00000607841 PRKDCP78527 4128 aaKnown RBP10.67□□□□□ -0.7
CTSA-219ENST00000607841 ELOA3CA0A087WX78 387 aaPredicted RBP10.67□□□□□ -0.7
CTSA-219ENST00000607841 A8MZ25 164 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 IFNA5P01569 189 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 OR5G3P0C626 314 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 RPL29P47914 159 aaKnown RBP10.67□□□□□ -0.7
CTSA-219ENST00000607841 OR8I2Q8N0Y5 310 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 ZNF709Q8N972 641 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 INO80EQ8NBZ0 244 aaPredicted RBP10.67□□□□□ -0.7
CTSA-219ENST00000607841 STXBP6Q8NFX7 210 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 FAM110AQ9BQ89 295 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 GGTLC1Q9BX51 225 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 DOK5Q9P104 306 aa10.67□□□□□ -0.7
CTSA-219ENST00000607841 ZNF98A6NK75 572 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 B2MP61769 119 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 PRR20EP86478 221 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 PRR20CP86479 221 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 PRR20DP86480 221 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 PRR20BP86481 221 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 PRR20AP86496 221 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 OPCMLQ14982 345 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 Q5BKY6 102 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 WFDC3Q8IUB2 231 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 STPG3Q8N7X2 389 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 OR1L4Q8NGR5 311 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 SCGB1C1Q8TD33 95 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 GPR82Q96P67 336 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 AQP10Q96PS8 301 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 NPCDR1Q9BY65 106 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 SLC25A39Q9BZJ4 359 aaPredicted RBP10.66□□□□□ -0.7
CTSA-219ENST00000607841 WDR61Q9GZS3 305 aaKnown RBP10.66□□□□□ -0.7
CTSA-219ENST00000607841 ARV1Q9H2C2 271 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 KCNIP2Q9NS61 270 aa10.66□□□□□ -0.7
CTSA-219ENST00000607841 C17orf112F2Z3M2 114 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 GALR1P47211 349 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 MIC13Q5XKP0 118 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 Q6ZNX1 250 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 PFDN5Q99471 154 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 SHANK2-AS3Q9BTD1 123 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 SMIM3Q9BZL3 60 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 SLC25A22Q9H936 323 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 NRN1Q9NPD7 142 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 SLC39A9Q9NUM3 307 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
CTSA-219ENST00000607841 SORL1Q92673 2214 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 FXYD6-FXYD2A0A087WZ82 144 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 H3BRN7 92 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 FRMD6-AS1P0C7T7 363 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 ZNF266Q14584 549 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 DEFB125Q8N687 156 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 C19orf73Q9NVV2 129 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 UBQLN2Q9UHD9 624 aa10.64□□□□□ -0.71
CTSA-219ENST00000607841 K7EQG2 157 aa10.63□□□□□ -0.71
CTSA-219ENST00000607841 RPL7P18124 248 aaKnown RBP10.63□□□□□ -0.71
CTSA-219ENST00000607841 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
CTSA-219ENST00000607841 PATE2Q6UY27 113 aa10.63□□□□□ -0.71
CTSA-219ENST00000607841 DCANP1Q8TF63 244 aa10.63□□□□□ -0.71
CTSA-219ENST00000607841 UHRF2Q96PU4 802 aa10.63□□□□□ -0.71
CTSA-219ENST00000607841 SCRT1Q9BWW7 348 aa10.63□□□□□ -0.71
CTSA-219ENST00000607841 PARD6GQ9BYG4 376 aaPredicted RBP10.63□□□□□ -0.71
CTSA-219ENST00000607841 SRD5A3Q9H8P0 318 aa10.63□□□□□ -0.71
CTSA-219ENST00000607841 SEPSECSQ9HD40 501 aaKnown RBP10.63□□□□□ -0.71
CTSA-219ENST00000607841 TNFSF18Q9UNG2 199 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms