RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 CD81P60033 236 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 PXDC1Q5TGL8 231 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 NEURL2Q9BR09 285 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 WDR83OSQ9Y284 106 aa10.71□□□□□ -0.69
CTSA-211ENST00000606066 UBE2L5PA0A1B0GUS4 154 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 HYPMO75409 117 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 LINC00869P0C866 280 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 CAMLGP49069 296 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 CMC4P56277 68 aaPredicted RBP10.7□□□□□ -0.7
CTSA-211ENST00000606066 C1orf194Q5T5A4 169 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 C16orf54Q6UWD8 224 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 TMEM182Q6ZP80 229 aaPredicted RBP10.7□□□□□ -0.7
CTSA-211ENST00000606066 Q8N1Y9 231 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 OR1B1Q8NGR6 318 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 FBXL17Q9UF56 701 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 HSPB11Q9Y547 144 aa10.7□□□□□ -0.7
CTSA-211ENST00000606066 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
CTSA-211ENST00000606066 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
CTSA-211ENST00000606066 DNASE2O00115 360 aaPredicted RBP10.69□□□□□ -0.7
CTSA-211ENST00000606066 PLP1P60201 277 aa10.69□□□□□ -0.7
CTSA-211ENST00000606066 CLINT1Q14677 625 aa10.69□□□□□ -0.7
CTSA-211ENST00000606066 Q6ZRG5 221 aa10.69□□□□□ -0.7
CTSA-211ENST00000606066 OR2T35Q8NGX2 323 aa10.69□□□□□ -0.7
CTSA-211ENST00000606066 MGST2Q99735 147 aa10.69□□□□□ -0.7
CTSA-211ENST00000606066 RNF24Q9Y225 148 aa10.69□□□□□ -0.7
CTSA-211ENST00000606066 CD7P09564 240 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 FGF7P21781 194 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 TFPI2P48307 235 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 SIGLEC15Q6ZMC9 328 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 GBGT1Q8N5D6 347 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 CHAC2Q8WUX2 184 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 GLMPQ8WWB7 406 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 ATP5SQ99766 215 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 ARL6Q9H0F7 186 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 MS4A6AQ9H2W1 248 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 TUBA4BQ9H853 241 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 HIGD1AQ9Y241 93 aa10.68□□□□□ -0.7
CTSA-211ENST00000606066 ELOA3CA0A087WX78 387 aaPredicted RBP10.67□□□□□ -0.7
CTSA-211ENST00000606066 A8MZ25 164 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 IFNA5P01569 189 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 OR5G3P0C626 314 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 RPL29P47914 159 aaKnown RBP10.67□□□□□ -0.7
CTSA-211ENST00000606066 OR8I2Q8N0Y5 310 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 ZNF709Q8N972 641 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 INO80EQ8NBZ0 244 aaPredicted RBP10.67□□□□□ -0.7
CTSA-211ENST00000606066 STXBP6Q8NFX7 210 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 FAM110AQ9BQ89 295 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 GGTLC1Q9BX51 225 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 DOK5Q9P104 306 aa10.67□□□□□ -0.7
CTSA-211ENST00000606066 ZNF98A6NK75 572 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 B2MP61769 119 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 PRR20EP86478 221 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 PRR20CP86479 221 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 PRR20DP86480 221 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 PRR20BP86481 221 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 PRR20AP86496 221 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 OPCMLQ14982 345 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 Q5BKY6 102 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 WFDC3Q8IUB2 231 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 STPG3Q8N7X2 389 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 OR1L4Q8NGR5 311 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 SCGB1C1Q8TD33 95 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 GPR82Q96P67 336 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 AQP10Q96PS8 301 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 NPCDR1Q9BY65 106 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 SLC25A39Q9BZJ4 359 aaPredicted RBP10.66□□□□□ -0.7
CTSA-211ENST00000606066 WDR61Q9GZS3 305 aaKnown RBP10.66□□□□□ -0.7
CTSA-211ENST00000606066 ARV1Q9H2C2 271 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 KCNIP2Q9NS61 270 aa10.66□□□□□ -0.7
CTSA-211ENST00000606066 C17orf112F2Z3M2 114 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 GALR1P47211 349 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 MIC13Q5XKP0 118 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 Q6ZNX1 250 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 PFDN5Q99471 154 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 SHANK2-AS3Q9BTD1 123 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 SMIM3Q9BZL3 60 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 SLC25A22Q9H936 323 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 NRN1Q9NPD7 142 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 SLC39A9Q9NUM3 307 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
CTSA-211ENST00000606066 SORL1Q92673 2214 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 FXYD6-FXYD2A0A087WZ82 144 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 H3BRN7 92 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 FRMD6-AS1P0C7T7 363 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 ZNF266Q14584 549 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 DEFB125Q8N687 156 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 WWC2-AS2Q96NR7 200 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 C19orf73Q9NVV2 129 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 UBQLN2Q9UHD9 624 aa10.64□□□□□ -0.71
CTSA-211ENST00000606066 K7EQG2 157 aa10.63□□□□□ -0.71
CTSA-211ENST00000606066 RPL7P18124 248 aaKnown RBP10.63□□□□□ -0.71
CTSA-211ENST00000606066 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms