RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 HIGD1AQ9Y241 93 aa13.44□□□□□ -0.26
DDX49-213ENST00000602113 TRAV5A0A0B4J249 113 aa13.43□□□□□ -0.26
DDX49-213ENST00000602113 I3L521 148 aa13.43□□□□□ -0.26
DDX49-213ENST00000602113 GGCTO75223 188 aaKnown RBP13.43□□□□□ -0.26
DDX49-213ENST00000602113 FAM209BQ5JX69 171 aa13.43□□□□□ -0.26
DDX49-213ENST00000602113 LINC00305Q7Z4B0 112 aa13.43□□□□□ -0.26
DDX49-213ENST00000602113 RNF2Q99496 336 aa13.43□□□□□ -0.26
DDX49-213ENST00000602113 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
DDX49-213ENST00000602113 STAG3L2P0CL84 134 aa13.42□□□□□ -0.26
DDX49-213ENST00000602113 STAG3L3P0CL85 134 aa13.42□□□□□ -0.26
DDX49-213ENST00000602113 KHDC1LQ5JSQ8 128 aa13.42□□□□□ -0.26
DDX49-213ENST00000602113 SLC7A5P1Q8MH63 180 aa13.42□□□□□ -0.26
DDX49-213ENST00000602113 FAM167A-AS1Q96KT0 104 aa13.42□□□□□ -0.26
DDX49-213ENST00000602113 C4orf3Q8WVX3 66 aa13.41□□□□□ -0.26
DDX49-213ENST00000602113 SLC25A2Q9BXI2 301 aa13.41□□□□□ -0.26
DDX49-213ENST00000602113 SLC25A39Q9BZJ4 359 aaPredicted RBP13.41□□□□□ -0.26
DDX49-213ENST00000602113 MED9Q9NWA0 146 aa13.41□□□□□ -0.26
DDX49-213ENST00000602113 IGHV4OR15-8A0A075B7B6 117 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 A0A087WW49 117 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 NDUFA4O00483 81 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 HBE1P02100 147 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 ARL14EPLP0DKL9 152 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 C8orf88P0DMB2 117 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 KRTAP10-3P60369 221 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 LEMD1Q68G75 181 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 UNQ9165/PRO28630Q6UXU0 137 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 CITED2Q99967 270 aaPredicted RBP13.4□□□□□ -0.26
DDX49-213ENST00000602113 SHANK2-AS3Q9BTD1 123 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 SCRT1Q9BWW7 348 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 TMPRSS5Q9H3S3 457 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 TECRQ9NZ01 308 aaKnown RBP13.4□□□□□ -0.26
DDX49-213ENST00000602113 H3BRN7 92 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 DEFB136Q30KP8 78 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 ZNF503Q96F45 646 aa13.4□□□□□ -0.26
DDX49-213ENST00000602113 HSPB1P04792 205 aaKnown RBP13.39□□□□□ -0.27
DDX49-213ENST00000602113 COMMD7Q86VX2 200 aa13.39□□□□□ -0.27
DDX49-213ENST00000602113 KLHL30-AS1Q8NEE0 82 aa13.39□□□□□ -0.27
DDX49-213ENST00000602113 WFDC12Q8WWY7 111 aa13.39□□□□□ -0.27
DDX49-213ENST00000602113 C20orf24Q9BUV8 137 aa13.39□□□□□ -0.27
DDX49-213ENST00000602113 PFDN2Q9UHV9 154 aa13.39□□□□□ -0.27
DDX49-213ENST00000602113 RABAC1Q9UI14 185 aa13.39□□□□□ -0.27
DDX49-213ENST00000602113 ZNF207O43670 478 aaKnown RBP13.38□□□□□ -0.27
DDX49-213ENST00000602113 CXorf1O96002 111 aa13.38□□□□□ -0.27
DDX49-213ENST00000602113 NDUFA5Q16718 116 aa13.38□□□□□ -0.27
DDX49-213ENST00000602113 IL34Q6ZMJ4 242 aa13.38□□□□□ -0.27
DDX49-213ENST00000602113 GPHB5Q86YW7 130 aa13.38□□□□□ -0.27
DDX49-213ENST00000602113 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
DDX49-213ENST00000602113 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
DDX49-213ENST00000602113 A0A1B0GUS0 222 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 A0A1W2PRX2 142 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 GCHFRP30047 84 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 TAS2R45P59539 299 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 RPEL1Q2QD12 228 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 KHDC3LQ587J8 217 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 TSSC4Q9Y5U2 329 aaPredicted RBP13.37□□□□□ -0.27
DDX49-213ENST00000602113 ZNF98A6NK75 572 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 NUDT19A8MXV4 375 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 OR7C2O60412 319 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 HOXD3P31249 432 aaPredicted RBP13.37□□□□□ -0.27
DDX49-213ENST00000602113 C8orf86Q6ZUL3 223 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 IQCF2Q8IXL9 164 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 DUX3Q96PT4 197 aa13.37□□□□□ -0.27
DDX49-213ENST00000602113 ZNF320A2RRD8 509 aa13.36□□□□□ -0.27
DDX49-213ENST00000602113 APOHP02749 345 aaPredicted RBP13.36□□□□□ -0.27
DDX49-213ENST00000602113 PYYP10082 97 aa13.36□□□□□ -0.27
DDX49-213ENST00000602113 CRYBB3P26998 211 aa13.36□□□□□ -0.27
DDX49-213ENST00000602113 PQLC2Q6ZP29 291 aa13.36□□□□□ -0.27
DDX49-213ENST00000602113 PRIMA1Q86XR5 153 aa13.36□□□□□ -0.27
DDX49-213ENST00000602113 OR1N2Q8NGR9 330 aa13.36□□□□□ -0.27
DDX49-213ENST00000602113 GNG13Q9P2W3 67 aa13.36□□□□□ -0.27
DDX49-213ENST00000602113 U3KQE9 123 aa13.36□□□□□ -0.27
DDX49-213ENST00000602113 ADARB2-AS1A8MUL3 147 aa13.35□□□□□ -0.27
DDX49-213ENST00000602113 OR10J4P0C629 311 aa13.35□□□□□ -0.27
DDX49-213ENST00000602113 GP9P14770 177 aa13.35□□□□□ -0.27
DDX49-213ENST00000602113 SRSF3P84103 164 aaKnown RBP13.35□□□□□ -0.27
DDX49-213ENST00000602113 FOXL1Q12952 345 aa13.35□□□□□ -0.27
DDX49-213ENST00000602113 FAM106AQ4KMX7 169 aa13.35□□□□□ -0.27
DDX49-213ENST00000602113 OR11H1Q8NG94 326 aa13.35□□□□□ -0.27
DDX49-213ENST00000602113 METTL26Q96S19 204 aa13.35□□□□□ -0.27
DDX49-213ENST00000602113 IGHV3-49A0A0A0MS15 119 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 LINC01619G3V211 115 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 NPPCP23582 126 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 PMS2P11Q13670 270 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 HAGHQ16775 308 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 FXYD5Q96DB9 178 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 RAX2Q96IS3 184 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 PAXXQ9BUH6 204 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 OR51M1Q9H341 326 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 IGHV3OR16-13A0A075B7E8 117 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 IGHV3-74A0A0B4J1X5 117 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 IGHV3-66A0A0C4DH42 116 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 RAB19A4D1S5 217 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 PSMB3P49720 205 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 SLURP1P55000 103 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 SYNJ2BPP57105 145 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 KLF5Q13887 457 aaPredicted RBP13.34□□□□□ -0.27
DDX49-213ENST00000602113 KRTAP24-1Q3LI83 254 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 S100A7AQ86SG5 101 aa13.34□□□□□ -0.27
DDX49-213ENST00000602113 SUN5Q8TC36 379 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms