RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 OVOL2Q9BRP0 275 aa12.34□□□□□ -0.43
SSBP4-213ENST00000602088 NRN1Q9NPD7 142 aa12.34□□□□□ -0.43
SSBP4-213ENST00000602088 MGAT4CQ9UBM8 478 aa12.34□□□□□ -0.43
SSBP4-213ENST00000602088 SLC45A2Q9UMX9 530 aa12.34□□□□□ -0.43
SSBP4-213ENST00000602088 FAM24AA6NFZ4 105 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 GOSR2O14653 212 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 SIX6O95475 246 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 ZNF688P0C7X2 276 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 CAV2P51636 162 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 S100A10P60903 97 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 SELENOTP62341 195 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 LEMD1Q68G75 181 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 Q6ZWC4 215 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
SSBP4-213ENST00000602088 ORM2P19652 201 aa12.32□□□□□ -0.44
SSBP4-213ENST00000602088 TEPPQ6URK8 271 aa12.32□□□□□ -0.44
SSBP4-213ENST00000602088 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
SSBP4-213ENST00000602088 PPP1R14BQ96C90 147 aa12.32□□□□□ -0.44
SSBP4-213ENST00000602088 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
SSBP4-213ENST00000602088 SEPSECSQ9HD40 501 aaKnown RBP12.32□□□□□ -0.44
SSBP4-213ENST00000602088 LYRM2Q9NU23 88 aaPredicted RBP12.32□□□□□ -0.44
SSBP4-213ENST00000602088 TP53TG1Q9Y2A0 90 aa12.32□□□□□ -0.44
SSBP4-213ENST00000602088 C3orf84H3BNL1 204 aa12.31□□□□□ -0.44
SSBP4-213ENST00000602088 CST7O76096 145 aa12.31□□□□□ -0.44
SSBP4-213ENST00000602088 SLC38A11Q08AI6 406 aa12.31□□□□□ -0.44
SSBP4-213ENST00000602088 OR8I2Q8N0Y5 310 aa12.31□□□□□ -0.44
SSBP4-213ENST00000602088 OR1B1Q8NGR6 318 aa12.31□□□□□ -0.44
SSBP4-213ENST00000602088 NMES1Q9C002 83 aa12.31□□□□□ -0.44
SSBP4-213ENST00000602088 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 SPRY2O43597 315 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 LINC00869P0C866 280 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 SULT1A1P50225 295 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 PLP1P60201 277 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 CYCSP99999 105 aaKnown RBP12.3□□□□□ -0.44
SSBP4-213ENST00000602088 DEFB135Q30KP9 77 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 TMEM252Q8N6L7 170 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 RNF183Q96D59 192 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 TMEM147Q9BVK8 224 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 AGRNO00468 2067 aa12.3□□□□□ -0.44
SSBP4-213ENST00000602088 DNAH7Q8WXX0 4024 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 AGPAT2O15120 278 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 SSNA1O43805 119 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 S100A7P31151 101 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 H2BFSP57053 126 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 SNRPD3P62318 126 aaKnown RBP12.29□□□□□ -0.44
SSBP4-213ENST00000602088 PSMG4Q5JS54 123 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 STHQ8IWL8 128 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 TMEM217Q8N7C4 229 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 DOK5Q9P104 306 aa12.29□□□□□ -0.44
SSBP4-213ENST00000602088 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 HYPMO75409 117 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 PTTG1O95997 202 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 RLN2P04090 185 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 S100A11P31949 105 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 RAP2BP61225 183 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 TRPT1Q86TN4 253 aaKnown RBP12.28□□□□□ -0.44
SSBP4-213ENST00000602088 ZNF546Q86UE3 836 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 GPR82Q96P67 336 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 SLC25A39Q9BZJ4 359 aaPredicted RBP12.28□□□□□ -0.44
SSBP4-213ENST00000602088 SLC25A32Q9H2D1 315 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 SLC25A22Q9H936 323 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 HIGD1AQ9Y241 93 aa12.28□□□□□ -0.44
SSBP4-213ENST00000602088 H0YIZ8 118 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 H3BRN7 92 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 SOCS3O14543 225 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 OR5G3P0C626 314 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 LYL1P12980 280 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 GALR1P47211 349 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 HBG1P69891 147 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 HBG2P69892 147 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 VWC2Q2TAL6 325 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 ACTL10Q5JWF8 245 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 PATE2Q6UY27 113 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 STX12Q86Y82 276 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 C17orf77Q96MU5 243 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 MGST2Q99735 147 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 SHANK2-AS3Q9BTD1 123 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 ARL6Q9H0F7 186 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 UQCC1Q9NVA1 299 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 OR5AC2Q9NZP5 309 aa12.27□□□□□ -0.45
SSBP4-213ENST00000602088 E5RGE8 158 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 ID1P41134 155 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 ATP6V1FQ16864 119 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 LRRC37A5PQ49AS3 106 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 PPP1R1CQ8WVI7 109 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 UHRF2Q96PU4 802 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 SCRT1Q9BWW7 348 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 WDR83OSQ9Y284 106 aa12.26□□□□□ -0.45
SSBP4-213ENST00000602088 ISLRO14498 428 aa12.25□□□□□ -0.45
SSBP4-213ENST00000602088 CA1P00915 261 aaPredicted RBP12.25□□□□□ -0.45
SSBP4-213ENST00000602088 CAMLGP49069 296 aa12.25□□□□□ -0.45
SSBP4-213ENST00000602088 PSMB3P49720 205 aa12.25□□□□□ -0.45
SSBP4-213ENST00000602088 MEOX2P50222 304 aa12.25□□□□□ -0.45
SSBP4-213ENST00000602088 RAB31Q13636 194 aa12.25□□□□□ -0.45
SSBP4-213ENST00000602088 CASC10Q5T4H9 136 aa12.25□□□□□ -0.45
SSBP4-213ENST00000602088 S100A7AQ86SG5 101 aa12.25□□□□□ -0.45
SSBP4-213ENST00000602088 GATAD1Q8WUU5 269 aa12.25□□□□□ -0.45
SSBP4-213ENST00000602088 RSG1Q9BU20 258 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms