RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 IGSF23A1L1A6 192 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 FNDC10F2Z333 226 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 K7EQG2 157 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 RLN2P04090 185 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 LINC00869P0C866 280 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 APOC4P55056 127 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 IL15RAQ13261 267 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 TEPPQ6URK8 271 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 TMEM182Q6ZP80 229 aaPredicted RBP9.5□□□□□ -0.89
USE1-209ENST00000601592 TMEM147Q9BVK8 224 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 NMES1Q9C002 83 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 C11orf1Q9H5F2 150 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 SLC25A22Q9H936 323 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 LYRM2Q9NU23 88 aaPredicted RBP9.5□□□□□ -0.89
USE1-209ENST00000601592 ALG5Q9Y673 324 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 TENM3Q9P273 2699 aa9.5□□□□□ -0.89
USE1-209ENST00000601592 DEDDO75618 318 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 OR5G3P0C626 314 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 H2BFSP57053 126 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 RAP2BP61225 183 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 HBG1P69891 147 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 HBG2P69892 147 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 CYCSP99999 105 aaKnown RBP9.49□□□□□ -0.89
USE1-209ENST00000601592 OR8I2Q8N0Y5 310 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 TMEM252Q8N6L7 170 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 GGACTQ9BVM4 153 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 NRN1Q9NPD7 142 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 FBXL17Q9UF56 701 aa9.49□□□□□ -0.89
USE1-209ENST00000601592 UBE2L5PA0A1B0GUS4 154 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 AGPAT2O15120 278 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 S100A7P31151 101 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 SULT1A1P50225 295 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 SELENOTP62341 195 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 PSMG4Q5JS54 123 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 ZNF546Q86UE3 836 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 STPG3Q8N7X2 389 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 DCANP1Q8TF63 244 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 ARL6Q9H0F7 186 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 UQCC1Q9NVA1 299 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 OR5AC2Q9NZP5 309 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 HIGD1AQ9Y241 93 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
USE1-209ENST00000601592 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 E5RGE8 158 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 HYPMO75409 117 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 S100A11P31949 105 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 SNRPD3P62318 126 aaKnown RBP9.47□□□□□ -0.89
USE1-209ENST00000601592 BAXQ07812 192 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 RAB31Q13636 194 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 DEFB135Q30KP9 77 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 C1orf194Q5T5A4 169 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 STHQ8IWL8 128 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 PPP1R1CQ8WVI7 109 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 SCRT1Q9BWW7 348 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 SLC45A2Q9UMX9 530 aa9.47□□□□□ -0.89
USE1-209ENST00000601592 KNCNA6PVL3 124 aa9.46□□□□□ -0.9
USE1-209ENST00000601592 PET100P0DJ07 73 aa9.46□□□□□ -0.9
USE1-209ENST00000601592 GALR1P47211 349 aa9.46□□□□□ -0.9
USE1-209ENST00000601592 UHRF2Q96PU4 802 aa9.46□□□□□ -0.9
USE1-209ENST00000601592 MGST2Q99735 147 aa9.46□□□□□ -0.9
USE1-209ENST00000601592 SLC25A39Q9BZJ4 359 aaPredicted RBP9.46□□□□□ -0.9
USE1-209ENST00000601592 SLC25A31Q9H0C2 315 aa9.46□□□□□ -0.9
USE1-209ENST00000601592 KIR2DL5BA0A0G2JN68 375 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 KIR2DL5BA0A0G2JPC4 375 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 H0YIZ8 118 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 H3BRN7 92 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 COX7A2P2O60397 106 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 FGF7P21781 194 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 CAMLGP49069 296 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 EWSR1Q01844 656 aaKnown RBP eCLIP9.45□□□□□ -0.9
USE1-209ENST00000601592 NHLH2Q02577 135 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 RGS21Q2M5E4 152 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 ACTL10Q5JWF8 245 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 S100A7AQ86SG5 101 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 KIR2DL5AQ8N109 375 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 KIR2DL5BQ8NHK3 375 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 MED28Q9H204 178 aa9.45□□□□□ -0.9
USE1-209ENST00000601592 UBE2CO00762 179 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 MPC2O95563 127 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
USE1-209ENST00000601592 ID1P41134 155 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 PLP1P60201 277 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 FGL1Q08830 312 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 CLINT1Q14677 625 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 ATP6V1FQ16864 119 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 OR5C1Q8NGR4 320 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 SHANK2-AS3Q9BTD1 123 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 RSG1Q9BU20 258 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 CSTL1Q9H114 145 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 ARV1Q9H2C2 271 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 MBD2Q9UBB5 411 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 WDR83OSQ9Y284 106 aa9.44□□□□□ -0.9
USE1-209ENST00000601592 SPRY2O43597 315 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 CA1P00915 261 aaPredicted RBP9.43□□□□□ -0.9
USE1-209ENST00000601592 CXCL3P19876 107 aa9.43□□□□□ -0.9
USE1-209ENST00000601592 FCN2Q15485 313 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms